Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe07g00604 | ATGGAGAAAGATATCGATGAAGTGGGAAAGATTGCACGAAGTGTGAAAACAAAGCTGGAAGCAATGAACAAGGAAAATTTAGCCAATAGAGAAAAGCCCGGATGTGGAAAGGGCACAGCAGTTGATCGGGCCAGACTGAATGTGACAAATGCTTTGACAAAGAAGTTCAAGGAGATAATGATTGAGTTTCAGGTATATCGACATTTAGTGATGTTTTTATATCAAAATGTATTTCATCCTATCCTCTTATCTGTATGCTTTCTTTATCAGACTCTCCGACAAAGAATTCAAGATGAATATCGTGAAACTATTGACCACCTCATCGAAACCGGAAATAGCGAACAAATCTTCCAAAAGGCGATTCAAGAATCAGGACGTGGACAGGTTATCAATACATTGGAAGAAATCCAGGAGAGGCATGATGCTGTAAGAGAAATCGAGGAAAAGCTTCTCGACTTACATCAGATTTATCTCGATATGGCAGTCTTAGTGGAGGCTCAAGGCGAAATTCTAGACAACATAGAAAACCAGGTTACGAATGCGGTTGATCACGTACAATCAGGGACAACTATGCTCCAAACTGCAAAGCAACTTCAGAGGAATTCTCGAAAGTGGATGTGCATTGCAATTCTTATTCTCTTGATAATAGTTGTCATAATAGTCGTCGGAGTCATCAAACCGTGGAAGAACAAGGGAGCGTAA | 702 | 40.17 | MEKDIDEVGKIARSVKTKLEAMNKENLANREKPGCGKGTAVDRARLNVTNALTKKFKEIMIEFQVYRHLVMFLYQNVFHPILLSVCFLYQTLRQRIQDEYRETIDHLIETGNSEQIFQKAIQESGRGQVINTLEEIQERHDAVREIEEKLLDLHQIYLDMAVLVEAQGEILDNIENQVTNAVDHVQSGTTMLQTAKQLQRNSRKWMCIAILILLIIVVIIVVGVIKPWKNKGA | 233 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 12739294 | 12740621 | - | Bpe021456.1 | Bpe07g00604 | 106373 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe07g00604 | 233 | CDD | SNARE_syntaxin1-like | 132 | 194 | - | - | |
| Bpe07g00604 | 233 | SMART | tSNARE_6 | 128 | 195 | IPR000727 | - | |
| Bpe07g00604 | 233 | PANTHER | SYNTAXIN OF PLANTS 122 PROTEIN | 1 | 77 | - | - | |
| Bpe07g00604 | 233 | PANTHER | SYNTAXIN OF PLANTS 122 PROTEIN | 102 | 225 | - | - | |
| Bpe07g00604 | 233 | PANTHER | SYNTAXIN | 1 | 77 | IPR045242 | - | |
| Bpe07g00604 | 233 | Pfam | SNARE domain | 169 | 221 | IPR000727 | - | |
| Bpe07g00604 | 233 | PANTHER | SYNTAXIN | 102 | 225 | IPR045242 | - | |
| Bpe07g00604 | 233 | Pfam | Syntaxin | 1 | 168 | IPR006011 | GO:0016020 | |
| Bpe07g00604 | 233 | Gene3D | - | 1 | 69 | - | - | |
| Bpe07g00604 | 233 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 133 | 195 | IPR000727 | - | |
| Bpe07g00604 | 233 | SUPERFAMILY | t-snare proteins | 2 | 188 | IPR010989 | GO:0016020|GO:0016192 | |
| Bpe07g00604 | 233 | Gene3D | - | 126 | 226 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe07g00604 | Bpe-Chr7:12739294 | Bpe08g00351 | Bpe-Chr8:2103594 | 3.40E-61 | dispersed | |
| Bpe07g00604 | Bpe-Chr7:12739294 | Bpe01g00396 | Bpe-Chr1:2457994 | 1.76E-62 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe07g00604 | K08486 | - | rcu:8264282 | 315.849 |