Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00606 AGTTTCTTCAAGGAGTGTCCTCACCCAGATGACAAACAGAGAAAAGAACTCAGTAGAGAATTAGGTTTAGAGCCATTGCAAGTCAAATTTTGGTTCCAAAACAAACGCACTCAAATGAAGAACCAGCATGAGCGCCATGAGAACTCGCAGCTTCGAGCAGAGAACGAAAAGTTTAGAGCAGATAACATGAGGTACAGAGAGGCTCTTAGCAATGCATCATGTCCCAACTGTGGAGGCCCTACGGCTATTGGAGAGATGTCTTTTGACGAACACCATTTGAGACTTGAAAATGCTCGTCTGCGAGAAGAGATTGATCGCATTTCAGCTATTGCTGCAAAATACGTCGGAAAGCCAATTTTGAACTACCCACTTTTGTCTTCTCCAGTTCCATCTCGTCCACTCGACCTCGGCATGGGAAACTTTGGCGGCCCACCTGGTATTGGAAGTGACATGTTTGGAAGTGCCAGCGATCTTCTACGATCAATCAGTGCTCCGACAGAGGCTGATAAACCAATGATAATTGAGCTTGCTGTTGCAGCTATGGAAGAGCTGATGAGAATGGCTCAGATGGGAGAGCCCTTGTGGATGACAACTCTTGATGGGGCAAATTCTATACTCAGTGAAGATGAATACATCAGAACATTTCCAAGAGGGATTGGGCCTAGACCCTCTGGATTTAAGTATGAAGCTTCTCGTGAAACTGCTGTTGTCATTATGAACCACATTAACCTCGTTGAGATAATCATGGATGTGAATCAATGGTCAACTGTATTTTCTGGAATTATCTCAAGAGCAATTACTCTGGAAGTGCTTTCAACTGGAGTTGCAGGAAATTATAATGGAGCTTTACAAGTGATGACATCGGAGTTTCAAGTCCCTTCTCCACTGGTTCCAACCAGAGAGAGTTATTTCGTAAGGTACTGTAAGCAGCACAGCGACGGAACATGGGCGGTGGTCGATGTTTCGTTGGATAATTTACGCCCAAGTCCGGCATTGAGATGTCGGCGGAGGCCGTCCGGCTGTTTGATCCAAGAAATGCCCAATGGATATTCTAAGGTCACTTGGGTAGAGCACGTGGAAGTTGATGATAGGGGTGTTCATAGTCTGTACAAGCAGCTGGTGTGCTCCGGCCATGCTTTTGGAGCGAAACGATGGATCGCAACCTTAGATCGTCAATGCGAACGCCTTGCAAGTGCTATGGCCACCGGAATTCCCGCCGGAGATGTTGGTGTAGTGATAACAAATCAAGAAGGGAGGAAGAGTATGTTGAAGTTAGCAGAGAGAATGGTTATAAGCTTCTGTGCTGGAGTCAGTGCTTCAACAACACATACGTGGACTACACTATCAGGAACTGGAGCAGATGATGTGAGGGTGATGACCCGTAAAAGCATTGACGATCCCGGGAGACCTCCCGGCATCGTTCTAAGTGCCGCCACCTCCTTCTGGCTTCCGGTTTCTCCCAAGAGAGTTTTCGATTTCCTTCGGGACGAAAATTCTCGAAGCGAGTGGGACATTCTTTCTAACGGCGGAGTTGTTCAAGAAATGGCACACATTGCCAACGGCCGCGACACTGGCAACTCCGTATCTTTGCTTCGGGTAAATAGTGCGAATTCGAGCCAGAGCAATATGCTGATTCTGCAAGAGAGTTGCACCGATCCGACTGGCTCTTTCGTGATTTATGCTCCGGTTGACATTGTAGCTATGAATGTGGTGTTGAATGGTGGAGACCCAGACTACGTTGCGCTTCTCCCTTCGGGATTTGCTATTCTTCCTGATGGAACTGCAACTCACAGTGCCGCCATTGGAGAAGCTTCTTCGGGTGGTTCTCTTTTAACCGTTGCATTTCAAATCTTGGTCGATTCCGTTCCGACTGCAAAACTATCTCTCGGGTCAGTTGCCACCGTCAATAATCTCATTGCCTGCACTGTTGAGAGGATCAAAGCTTCGTTGTCATGCGAAAATGCATGA 1968 47.1 SFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRAENEKFRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPILNYPLLSSPVPSRPLDLGMGNFGGPPGIGSDMFGSASDLLRSISAPTEADKPMIIELAVAAMEELMRMAQMGEPLWMTTLDGANSILSEDEYIRTFPRGIGPRPSGFKYEASRETAVVIMNHINLVEIIMDVNQWSTVFSGIISRAITLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYFVRYCKQHSDGTWAVVDVSLDNLRPSPALRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYKQLVCSGHAFGAKRWIATLDRQCERLASAMATGIPAGDVGVVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVSPKRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNSVSLLRVNSANSSQSNMLILQESCTDPTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTATHSAAIGEASSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCENA 655
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 12804133 12807371 + Bpe021458.1 Bpe07g00606 106375
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00606 655 SUPERFAMILY Bet v1-like 166 397 - -
Bpe07g00606 655 SMART START_1 175 395 IPR002913 GO:0008289
Bpe07g00606 655 SUPERFAMILY Bet v1-like 415 647 - -
Bpe07g00606 655 Pfam START domain 176 395 IPR002913 GO:0008289
Bpe07g00606 655 Coils Coil 36 68 - -
Bpe07g00606 655 ProSitePatterns 'Homeobox' domain signature. 17 40 IPR017970 GO:0000981|GO:0006355
Bpe07g00606 655 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 2 652 - -
Bpe07g00606 655 SMART HOX_1 1 46 IPR001356 GO:0003677
Bpe07g00606 655 CDD homeodomain 1 43 IPR001356 GO:0003677
Bpe07g00606 655 ProSiteProfiles 'Homeobox' domain profile. 1 42 IPR001356 GO:0003677
Bpe07g00606 655 Gene3D - 228 390 IPR023393 -
Bpe07g00606 655 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Bpe07g00606 655 Pfam Homeodomain 2 41 IPR001356 GO:0003677
Bpe07g00606 655 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 652 IPR042160 -
Bpe07g00606 655 Gene3D - 1 58 - -
Bpe07g00606 655 ProSiteProfiles START domain profile. 166 398 IPR002913 GO:0008289
Bpe07g00606 655 CDD START_ArGLABRA2_like 170 394 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe07g00606 Bpe12g00225 CCT
Bpe07g00606 Bpe12g00225 ECH
Bpe07g00606 Bpe14g00705 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00606 Bpe-Chr7:12804133 Bpe08g00001 Bpe-Chr8:7286 0 dispersed
Bpe12g00225 Bpe-Chr12:1885649 Bpe07g00606 Bpe-Chr7:12804133 0 wgd
Bpe14g00705 Bpe-Chr14:5506370 Bpe07g00606 Bpe-Chr7:12804133 0 wgd
Bpe15g00712 Bpe-Chr15:17670077 Bpe07g00606 Bpe-Chr7:12804133 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21639 PF01852 START 1.50E-58 CL0209 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00606 K09338 - pvy:116137135 1189.1