Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00626 ATGAAACCTCGAATTTGGTGGGTGTTCTTGCTCTTAATCTCTTCGTTTTTGAGAGCTGAATCGGACTGTAATCAACGCTGTGATTTAGCTTTAGCTTCTTACTTCGTATGGCCAAATTCAAACCTCTCATTCATATCGCAAGTGATGAACGCCTCCATCGATTCTATCTTGGAATTCAACAAAGATTCTATTGCGAACAAAGATATTGTTGACAGCGGAACTAGGGTGAATGTTCCATTTCCATGCGGTTGCCTCGAGAATAGTTTTCTAGGGCATACGTTTACTTATGCGATTAAGAGTGGAGATACCTATGATGATATTTCTGGTACCTACTACTCAAACTTGACGACGACCCAGATGTTGCAGAGATTCAATAGCTATGATCCTAGTAATCTTGCTATTGGTTCTATATTGAACGTGGTGGTGAATTGCTCCTGTGGAAATTCTTCAGTTTCAGAGGATTTCGGATTGTTTATTACTTATCCTCTTCGCGGGGATGATAGCTTGGATAAATTATCGGCTCAAACGAATATTAGTTCTGATTTGCTTCAAGCGTATAACCCAGGAGCCAATTTCAGCGCAGGGAGTGGATTGGTTTTTATTCCAGGAAAAGCAGGACTTGGAGCTGGAGCCATTGCAGGTATAGTTATAGCAGTAGTGGCAGTGGTGCTATTATTAGCTGCTTGCTTCTACTTTGGATTTTACCGAAGGAAGAAGATTCGAGATGCAAGATTGCTAAATGTATCTCAAGAGCTAAGTCCTCGAGGTAGCTTTCCTGCATTTGATGAGTATAAATCGACTGAAGAAAGTGGTCCCAGGAGTGGGACTACTCCTCGATTTACAGGCATTACAGTGGATAAATCCGTTGAGTTCTCCTACGAAGAACTTGCTGGGGCTACTAGTGATTTCAGTTTAGCTAATAAGATCGGTGAAGGTGGTTTTGGATCTGTTTACTACGCAGAATTGAGAGGCGAGAAAGCAGCAATCAAGAAGATGGATATGCAGGCGACGAAAGAATTCCTTGCGGAGCTACAAGTTCTAACACGTGTTCATCATTTGAACTTGGTGCGGCTCATTGGATATTGCGTCGAGGGTTCTCTTTTTCTAGTTTACGAATTCATCGAAAATGGGAACTTAAGCCAGCATTTGAGAGGCGCAGGGAGAGATCCATTGCCTTGGTCTAGGCGGGTGCAAATCGCCCTCGATTCGGCTAGAGGGCTTGAATATATTCATGAACATACAGTTCCGGTTTATATCCATCGCGATATCAAGTCAGCAAATATATTGATCGACAAGAACTTCCGTGGAAAGGTTGCAGATTTTGGATTGACTAAATTGACCGAAGTTGGAAATACAATCCCGACACGACTCGTGGGCACATTTGGATACATGCCTCCTGAGTACGCTCAATATGGCGATGTTTCTCCGAAAATAGATGTATATGCTTTCGGGGTTGTTCTGTATGAACTTATTTCTGCAAAGGAAGCTGTTGTCAAAACAAATCGTGCAAGCGCCATTAACGAATCCAAGGGCCTGGTGGCCTTGTTTGAGGATGTGCTTAATGAGCCCGATCCTAGAGAAAGTCTGCGGAAAGTCGTAGACCCAAGACTCGAAGATAACTATCCGCTCGAATCCGTCCTCAAGACAGCTCAGCTGGCTAAAGCATGTACACATGAAAATCCACAATTACGGCCGAGCATGAGATCGATCGTGGTTGCGTTAATGACTCTTTCGTCCTCAACGGAAGACTGGGATGTTGGCTCCTTCTATGAAAATCAAGCTCTTGTCAATCTCATGTCTGGAAGGTAG 1809 43.39 MKPRIWWVFLLLISSFLRAESDCNQRCDLALASYFVWPNSNLSFISQVMNASIDSILEFNKDSIANKDIVDSGTRVNVPFPCGCLENSFLGHTFTYAIKSGDTYDDISGTYYSNLTTTQMLQRFNSYDPSNLAIGSILNVVVNCSCGNSSVSEDFGLFITYPLRGDDSLDKLSAQTNISSDLLQAYNPGANFSAGSGLVFIPGKAGLGAGAIAGIVIAVVAVVLLLAACFYFGFYRRKKIRDARLLNVSQELSPRGSFPAFDEYKSTEESGPRSGTTPRFTGITVDKSVEFSYEELAGATSDFSLANKIGEGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELQVLTRVHHLNLVRLIGYCVEGSLFLVYEFIENGNLSQHLRGAGRDPLPWSRRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGNTIPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNRASAINESKGLVALFEDVLNEPDPRESLRKVVDPRLEDNYPLESVLKTAQLAKACTHENPQLRPSMRSIVVALMTLSSSTEDWDVGSFYENQALVNLMSGR 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12960216 12964050 - Bpe021477.1 Bpe07g00626 106395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00626 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Bpe07g00626 602 Pfam LysM domain 96 140 IPR018392 -
Bpe07g00626 602 Gene3D Transferase(Phosphotransferase) domain 1 374 593 - -
Bpe07g00626 602 SMART LysM_2 33 79 IPR018392 -
Bpe07g00626 602 SMART LysM_2 95 141 IPR018392 -
Bpe07g00626 602 SUPERFAMILY Protein kinase-like (PK-like) 282 574 IPR011009 -
Bpe07g00626 602 SMART serkin_6 303 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00626 602 ProSiteProfiles LysM domain profile. 94 140 IPR018392 -
Bpe07g00626 602 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 8 602 - -
Bpe07g00626 602 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00626 602 Gene3D Phosphorylase Kinase; domain 1 288 373 - -
Bpe07g00626 602 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 602 IPR044812 GO:0019199|GO:0045087
Bpe07g00626 602 ProSiteProfiles Protein kinase domain profile. 303 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00626 602 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00626 Bpe-Chr7:12960216 Bpe10g00918 Bpe-Chr10:14803184 2.40E-74 dispersed
Bpe09g00005 Bpe-Chr9:54296 Bpe07g00626 Bpe-Chr7:12960216 1.52E-89 transposed
Bpe10g00811 Bpe-Chr10:14196531 Bpe07g00626 Bpe-Chr7:12960216 6.77E-94 transposed
Bpe14g00746 Bpe-Chr14:5740847 Bpe07g00626 Bpe-Chr7:12960216 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63420 PF00069 Pkinase 2.10E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00626 - K13429 csv:101203576 827.009