Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00642 ATGTATGGAACCCAAAACAGAAGCGATTTCTCCTTGGATTTCCACCCTCATATTCCCATTTCAAGGCCAAGCATCTATTCCCGCAAAGCCAATCTCACAGTGAAATTTCAAGATCTTTATGGGTTTACTGTAGAAGGCAATGTTGATGATGTTAATGTGTTAAACGAAGTGAGAGAGAAGGTGAGGCAGCAGGGCCGAATTTGGTGGGCATTAGAGGCAAACAAGGGGGCAAATTGGTATCTCGAGCCTTCCATATCTGAAGGAATTGCCCTTAAATCCTCCCTCAAATTATCAGTTCTGGCAAATGCTATTACATTGAAGAAGCTGATAAGGAAAGGGATTCCGCCGGTTCTCCGGCCTAAGATCTGGTTTTCTTTGTCTGGGGCGGCGAAGAAGAAGTCAACAGTGCCGGAGAGTTACTATCATGACTTATTGAAAGCTGTTGAGGGGAAGGTTACACCTGCTACGAGACAAATAGATCATGACCTACAGCGGACATTTCCTGGTCATCCATGGCTGGACACCCCAGAGGGTCATTCTGCTCTCAGACGAGTTCTCGTTGGATATTCCTTCCGGGACTCTGACGTTGGCTACTGCCAAGGATTGAACTATGTGGCAGCGTTGTTGCTACTCGTGATGAAAACAGAGGAAGATGCTTTCTGGATGCTGGCGGTGCTTCTAGAGAATGTGTTGGTTAATGATTGCTATACGACTAACCTATCTGGATGCCATGTCGAACAAAGGGTGTTCAAAGATTTACTCACTAAAAAGTGCCCGAGGTACTTGATTTTTGCTCGTTTTCTAATCTACCTACTCGACATCTATTGGCCAATATATAAAATATGGAAAGAACAATGCAGGATAGCTGCTCATTTAGAAGCGTTAGAGTTCGATGTCTCCCTTGTTGCCACCGAGTGGTTCCTCTGCCTCTTTTCCAAGAGCCTGCCTTCAGAGACAACTCTGCGCGTATGGGACGTGCTGTTCTTCGAGGGGGCTAAGGTTCTATTCCATGTAGCTTTAGCGATCTTTAAGATGGATGAAGAGGAGTTGCTTGTAACTTATCACGTGGGTGATGTCATCAACATTTTGCAGAAAACCACCCATCACCTCTTCGACCCCGACGAATTATTGACAGTGGCATTTGATAAGATTGGTTCAATGACAACCACCACCATATCAAAACAACGAAAAAAGCAGGAACCTGCCGTTATGGCCGAGATCGATCAGAGATTGAGGAGACTAAACTCTGTCAAGCTCGATGAGAGTAACAATGAGTAA 1278 45.07 MYGTQNRSDFSLDFHPHIPISRPSIYSRKANLTVKFQDLYGFTVEGNVDDVNVLNEVREKVRQQGRIWWALEANKGANWYLEPSISEGIALKSSLKLSVLANAITLKKLIRKGIPPVLRPKIWFSLSGAAKKKSTVPESYYHDLLKAVEGKVTPATRQIDHDLQRTFPGHPWLDTPEGHSALRRVLVGYSFRDSDVGYCQGLNYVAALLLLVMKTEEDAFWMLAVLLENVLVNDCYTTNLSGCHVEQRVFKDLLTKKCPRYLIFARFLIYLLDIYWPIYKIWKEQCRIAAHLEALEFDVSLVATEWFLCLFSKSLPSETTLRVWDVLFFEGAKVLFHVALAIFKMDEEELLVTYHVGDVINILQKTTHHLFDPDELLTVAFDKIGSMTTTTISKQRKKQEPAVMAEIDQRLRRLNSVKLDESNNE 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13159986 13162141 + Bpe021495.2 Bpe07g00642 106411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00642 425 Gene3D - 99 128 - -
Bpe07g00642 425 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 283 396 - -
Bpe07g00642 425 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 1 262 - -
Bpe07g00642 425 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 288 382 IPR035969 -
Bpe07g00642 425 SMART tbc_4 110 354 IPR000195 -
Bpe07g00642 425 Gene3D - 235 405 - -
Bpe07g00642 425 Pfam Rab-GTPase-TBC domain 287 351 IPR000195 -
Bpe07g00642 425 Pfam Rab-GTPase-TBC domain 118 260 IPR000195 -
Bpe07g00642 425 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 283 396 - -
Bpe07g00642 425 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 129 234 - -
Bpe07g00642 425 ProSiteProfiles TBC/rab GAP domain profile. 113 331 IPR000195 -
Bpe07g00642 425 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 1 262 - -
Bpe07g00642 425 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 105 260 IPR035969 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00642 Bpe14g00746 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01405 Bpe-Chr2:17544302 Bpe07g00642 Bpe-Chr7:13159986 1.23E-32 dispersed
Bpe07g00642 Bpe-Chr7:13159986 Bpe15g01083 Bpe-Chr15:20022907 2.01E-39 dispersed
Bpe15g00739 Bpe-Chr15:17854230 Bpe07g00642 Bpe-Chr7:13159986 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00642 - - egr:104434918 705.671