Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00646 ATGGCGGATTCAGACAACGAATCAGGAGGGCACAACAGCAACACGAATAGCGAGCACTCGAGGGAGCAAGATAGATTCTTGCCCATAGCCAATGTAAGCAGAATAATGAAGAAAGCACTACCAGCAAACGCCAAGATCTCGAAAGACGCAAAAGAAACAGTCCAAGAATGTGTATCGGAGTTCATCAGCTTCATCACCGGCGAGGCTTCCGACAAGTGCCAGAGGGAAAAAAGGAAGACGATCAACGGCGACGATTTGTTGTGGGCCATGACTACTTTAGGCTTCGAAGAGTACGTAGAGCCTCTGAAAGTTTATCTGCAGAAGTACAGAGAAACGGAAGGAGAGAAGACTTCTGTCGGAAGACAGGGTGAAAAAGACGGCGGCGTAGGTGGGTCCAGCTCCGCCAGTACTGATGCAGCCGGTGCTGTGAGTGGGGGCGGCTTCAATGGAGTCGGCGGGATGTACGGCGGGATGATGATGATGGGGCATCATCAGGGACACGCATACGGTTCAGGCGGATATCATCGGATGGGAATCGGCAGTCAGAAAGACGGAACCGGCGGGCCAGGTTCCGGGAACCGTTGA 585 52.82 MADSDNESGGHNSNTNSEHSREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQKYRETEGEKTSVGRQGEKDGGVGGSSSASTDAAGAVSGGGFNGVGGMYGGMMMMGHHQGHAYGSGGYHRMGIGSQKDGTGGPGSGNR 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13218659 13219243 - Bpe021499.2 Bpe07g00646 106415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00646 194 MobiDBLite consensus disorder prediction 1 24 - -
Bpe07g00646 194 ProSitePatterns NF-YB/HAP3 subunit signature. 57 73 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bpe07g00646 194 Gene3D Histone, subunit A 13 140 IPR009072 GO:0046982
Bpe07g00646 194 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 90 IPR003958 -
Bpe07g00646 194 MobiDBLite consensus disorder prediction 112 143 - -
Bpe07g00646 194 SUPERFAMILY Histone-fold 23 125 IPR009072 GO:0046982
Bpe07g00646 194 PRINTS CCAAT-binding transcription factor subunit A signature 54 72 - -
Bpe07g00646 194 PRINTS CCAAT-binding transcription factor subunit A signature 73 91 - -
Bpe07g00646 194 PRINTS CCAAT-binding transcription factor subunit A signature 92 110 - -
Bpe07g00646 194 MobiDBLite consensus disorder prediction 1 16 - -
Bpe07g00646 194 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3 1 173 - -
Bpe07g00646 194 MobiDBLite consensus disorder prediction 173 194 - -
Bpe07g00646 194 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 173 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00757 Bpe-Chr3:27614733 Bpe07g00646 Bpe-Chr7:13218659 3.23E-46 dispersed
Bpe04g01683 Bpe-Chr4:22804541 Bpe07g00646 Bpe-Chr7:13218659 1.08E-58 dispersed
Bpe07g00646 Bpe-Chr7:13218659 Bpe09g00129 Bpe-Chr9:873594 7.24E-77 dispersed
Bpe15g01076 Bpe-Chr15:19984528 Bpe07g00646 Bpe-Chr7:13218659 3.67E-38 dispersed
Bpe01g00251 Bpe-Chr1:1520023 Bpe07g00646 Bpe-Chr7:13218659 1.97E-12 transposed
Bpe04g01195 Bpe-Chr4:14481869 Bpe07g00646 Bpe-Chr7:13218659 1.76E-46 transposed
Bpe15g00441 Bpe-Chr15:15878632 Bpe07g00646 Bpe-Chr7:13218659 2.40E-59 transposed
Bpe14g00737 Bpe-Chr14:5698458 Bpe07g00646 Bpe-Chr7:13218659 1.67E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21646 PF00808 CBFD_NFYB_HMF 1.80E-27 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00646 K08065 - csv:101219076 267.314