Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00667 ATGGGTCTCTCGAGCCTTCCGACTCCATCCGACGGAATACTTTCTGTATTAGTACAAACTGCATTATCCATTTCCTTCTTCAAAAGCATAGTTGGATCGATTCTCCATGTCATCGACATTGGCATCTTGTCATCATCCTCTTCACATTTGCCAGCAGACTCTGTCGAAATTTCTGCAGACTGCCTCGATTTTCATCTAGGTTATTCCGAGACATATGCAGAGGAATTCCGAAGGAGAGTGCCCACCATTCGATTCGACAAAGCATGCAACAGTCGGCAGGCTGAGCTGAACTGCACTGTTTGCTTGACTCAATTTGAGCCTGAATCAGAGATTAACCTGTTATCTTGTGGCCATATTTTTCACAAAGGGTGCTTGGAGAAGTGGCTGGACTACTGGAATGTCACATGCCCAATGTGTAGGACTCCATTAATGCCAGAAGAAGAGAGAGTTAGGTAA 456 44.96 MGLSSLPTPSDGILSVLVQTALSISFFKSIVGSILHVIDIGILSSSSSHLPADSVEISADCLDFHLGYSETYAEEFRRRVPTIRFDKACNSRQAELNCTVCLTQFEPESEINLLSCGHIFHKGCLEKWLDYWNVTCPMCRTPLMPEEERVR 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13366502 13366957 - Bpe021517.1 Bpe07g00667 106436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00667 151 Pfam Ring finger domain 97 140 IPR001841 -
Bpe07g00667 151 PANTHER - 1 148 IPR044249 -
Bpe07g00667 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 145 IPR013083 -
Bpe07g00667 151 SUPERFAMILY RING/U-box 94 145 - -
Bpe07g00667 151 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 148 - -
Bpe07g00667 151 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Bpe07g00667 151 SMART ring_2 98 139 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00667 Bpe15g00763 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00667 Bpe-Chr7:13366502 Bpe13g01047 Bpe-Chr13:16138526 1.14E-16 dispersed
Bpe07g00543 Bpe-Chr7:11780758 Bpe07g00667 Bpe-Chr7:13366502 8.99E-08 transposed
Bpe15g00763 Bpe-Chr15:17984259 Bpe07g00667 Bpe-Chr7:13366502 3.00E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00667 K16285 - gmx:100305532 193.741