Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe07g00667 | ATGGGTCTCTCGAGCCTTCCGACTCCATCCGACGGAATACTTTCTGTATTAGTACAAACTGCATTATCCATTTCCTTCTTCAAAAGCATAGTTGGATCGATTCTCCATGTCATCGACATTGGCATCTTGTCATCATCCTCTTCACATTTGCCAGCAGACTCTGTCGAAATTTCTGCAGACTGCCTCGATTTTCATCTAGGTTATTCCGAGACATATGCAGAGGAATTCCGAAGGAGAGTGCCCACCATTCGATTCGACAAAGCATGCAACAGTCGGCAGGCTGAGCTGAACTGCACTGTTTGCTTGACTCAATTTGAGCCTGAATCAGAGATTAACCTGTTATCTTGTGGCCATATTTTTCACAAAGGGTGCTTGGAGAAGTGGCTGGACTACTGGAATGTCACATGCCCAATGTGTAGGACTCCATTAATGCCAGAAGAAGAGAGAGTTAGGTAA | 456 | 44.96 | MGLSSLPTPSDGILSVLVQTALSISFFKSIVGSILHVIDIGILSSSSSHLPADSVEISADCLDFHLGYSETYAEEFRRRVPTIRFDKACNSRQAELNCTVCLTQFEPESEINLLSCGHIFHKGCLEKWLDYWNVTCPMCRTPLMPEEERVR | 151 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 13366502 | 13366957 | - | Bpe021517.1 | Bpe07g00667 | 106436 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe07g00667 | 151 | Pfam | Ring finger domain | 97 | 140 | IPR001841 | - | |
Bpe07g00667 | 151 | PANTHER | - | 1 | 148 | IPR044249 | - | |
Bpe07g00667 | 151 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 64 | 145 | IPR013083 | - | |
Bpe07g00667 | 151 | SUPERFAMILY | RING/U-box | 94 | 145 | - | - | |
Bpe07g00667 | 151 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED | 1 | 148 | - | - | |
Bpe07g00667 | 151 | ProSiteProfiles | Zinc finger RING-type profile. | 98 | 140 | IPR001841 | - | |
Bpe07g00667 | 151 | SMART | ring_2 | 98 | 139 | IPR001841 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe07g00667 | Bpe15g00763 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g00667 | Bpe-Chr7:13366502 | Bpe13g01047 | Bpe-Chr13:16138526 | 1.14E-16 | dispersed | |
Bpe07g00543 | Bpe-Chr7:11780758 | Bpe07g00667 | Bpe-Chr7:13366502 | 8.99E-08 | transposed | |
Bpe15g00763 | Bpe-Chr15:17984259 | Bpe07g00667 | Bpe-Chr7:13366502 | 3.00E-52 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe07g00667 | K16285 | - | gmx:100305532 | 193.741 |