Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00668 ATGGGTTATATATGTGATTTTTGCGCTGAGCAAAGGTCGATGGTTTATTGCCGTTCCGATGCTGCCTGTTTATGTTTATCATGCGATCGAAGTGTCCATTCTGCTAATGCCTTGTCAAAGCGCCACTCGAGAACACTCCTATGTGAAAAGTGCAATTCTCAGCCTGCAGTAGTAAGATGTGTTGAAGAGAAGATTACCCTTTGCCAAAATTGTGATTGGACTGGCCACAGCCCATCTACCTCTTCTGATTCGCATAAAAGGCAGACCATAAATTGTTATTCTGGCTGCCCATCTGCTGCAGAACTTTCTTGTATATGGTCTTTTGTTTTGGATCTTCCAGCTGCTGAGGGTGATGCTTGTGAAAAAGAATTAGGATTGATGAGTATTACCGACGAAAGTACAAAGAATGGTTGGGGCAATTATAACAATGATATTGGTCAAAAAACATCTAATTCGGTCGAGTGTAAATCATCTGGTTTGGAAGCTTCCTCTCTGATACCTGAGTTTGGCACTATGCCTCATCTTCTAAGCGTGCCTGCCGGATCTTCTAATGTAACTTTGCCCAAGTTGTACTGTCCTGCAACAAAAGATACCGGTCGTTTCTGCGAAGGTGACGTCCTTGATGACGATTTCAATATGGATGAACTTGATTTTGATATTGAAAACTACGAGGAATTATTTCGAGTAGCTCTAAATCACTCTGAGGAGCTTTTTGAGAATGGTGGGATTGCTAGTTTATATGCGGCGAAGGATATGTCGGTTGCTGATTCTAGTTGCCGGGGTGAAGTCACTGCTGAGGGTTCATCAGCTGGACATGTTGATACTGTACAGCCAGCGTGTAGTACAGCAGCATCTGTCGAATCTATGATGAGTGCTAAAACAGACTCAATTCTTTACTTTAACGCAAGACAAGCACATTCGGGTCTGCCACTTTCTGGCCTTGCCGGAGAGAGTAGTGTGGGAGTTTGGGGAGCTTCATCAATGCCGGCAATGGGAGAGCCTAGATGGTGCCCCCCATGCGCTGAGAGTTCCATCCAATCGGCTAATCGTAGTAATGCTGTCCTGCGGTATCAAAAGAAGAAGAAGGATCGCAAGTTTGAGAAAAGAGTGAGGTATGCTTCTCGGAAAGCAAGGGCAGACGTAAGAAGGCGTGTGAAGGGACGATTTGTCAAAGCTGGAGATGCTTATGACTATGACCCATTGAGCCAAACCAGAAGCTACTGA 1224 44.69 MGYICDFCAEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLLCEKCNSQPAVVRCVEEKITLCQNCDWTGHSPSTSSDSHKRQTINCYSGCPSAAELSCIWSFVLDLPAAEGDACEKELGLMSITDESTKNGWGNYNNDIGQKTSNSVECKSSGLEASSLIPEFGTMPHLLSVPAGSSNVTLPKLYCPATKDTGRFCEGDVLDDDFNMDELDFDIENYEELFRVALNHSEELFENGGIASLYAAKDMSVADSSCRGEVTAEGSSAGHVDTVQPACSTAASVESMMSAKTDSILYFNARQAHSGLPLSGLAGESSVGVWGASSMPAMGEPRWCPPCAESSIQSANRSNAVLRYQKKKKDRKFEKRVRYASRKARADVRRRVKGRFVKAGDAYDYDPLSQTRSY 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13370606 13372596 - Bpe021518.1 Bpe07g00668 106437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00668 407 CDD Bbox1_BBX-like 4 47 - -
Bpe07g00668 407 ProSiteProfiles CCT domain profile. 350 392 IPR010402 GO:0005515
Bpe07g00668 407 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Bpe07g00668 407 Pfam CCT motif 350 392 IPR010402 GO:0005515
Bpe07g00668 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 407 - -
Bpe07g00668 407 CDD Bbox1_BBX-like 47 90 - -
Bpe07g00668 407 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bpe07g00668 407 SMART bboxneu5 48 90 IPR000315 GO:0008270
Bpe07g00668 407 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe07g00668 407 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 9-LIKE 1 407 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00668 Bpe12g00169 CCT
Bpe07g00668 Bpe15g00764 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00444 Bpe-Chr3:23437253 Bpe07g00668 Bpe-Chr7:13370606 3.32E-30 dispersed
Bpe07g00668 Bpe-Chr7:13370606 Bpe14g00696 Bpe-Chr14:5459494 4.32E-65 dispersed
Bpe12g00169 Bpe-Chr12:1275341 Bpe07g00668 Bpe-Chr7:13370606 1.38E-142 wgd
Bpe15g00764 Bpe-Chr15:17989759 Bpe07g00668 Bpe-Chr7:13370606 2.51E-13 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21648 PF06203 CCT 3.20E-14 CL0281 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00668 - - jre:109000761 558.525