Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00688 ATGGAGTCACAATCAGGAGATCTTCAGAAAGTAGCACAAGATTTGACGGATGCTTTGTCTACGCTTGAGCATACATTCGTCGTCTCCGATGCTACAAAACCAGATTGCCCGATAGTTTACGCCAGCGGTGGGTTTTTCACCATGACTGGCTATTCCTCAGACGAAGTCATTGGAAGGAACTGCCGATTCCTTCAAGGAGCAGACACAGACCAAAATGAAGTTGACAAAATTCGAAATGCAGTGAGGAATGGAAAAAGCTACTGCGGCCGGCTCTTGAACTACAAGAAGGACGGTTCTCCTTTCTGGAATCTTCTCACTGTCACTCCAATTAAAGATGAAAATGGCAAAGCCATCAAATTTATCGGAATGCAGATTGAGGTCAGCAAACACACAGAAGGCGTGATCGACAAGGCATTACGTCCAAATGGATTGCCCCAATCATTAATCCGCTATGATGCTCGACAGAAAGAGAAGGCTCTGAACTCAATTGAAGAAGTTCTCCAGACTGTTAGACACCCTCAACCTCTCACGCGAACTACCAGCCACAGTTCTGTCTTCAAACGCCAAGAGTCTACACAATCCAGATCTGATTATGCCGAAGCTATCACTACGCCAGGGAGACAAACTTATCAATTGGATTCTAAAGTTGATCTGTCTCATCCAGGTGCATACGGAGATTCATCAAAGAAATTTGGATTATCGAGTCGGCTTTCCTTAATGGGGTTCAAAGGGAGGTCTGTGAGCACAACAGGGAGTCGTGAACAAAAAACAACCATTGAACCAGTGATTTTGATGACTAAAGAAATTGAGCGCACTGACAGTTGGGATCATGATGAAAGAGAAAGGGATATTCGTCAAGGAATCGATTTGGCAACCACGTTGGAACGAATTGAGAAAAATTTTGTGATTACAGATCCTAGAATTCCTGATAATCCAATTATATTTGCATCTGATAGCTTTCTCGAATTGACGGAATATACACGAGAAGAAGTCTTAGGAAGAAATTGTCGGTTTCTTCAAGGACCTGAAACAGATCAAGCCACTGTATCACAGATAAGAGATGCTATCAGAGAACTGAAGGAAGTCACAGTTCAGTTAATTAACTATACAAAGACTGGTAAGAAGTTTTGGAATTTATTCCACTTGCAGCCCATGCGAGACCAAAAGGGTGAGTTGCAATACTTCATTGGTGTACAACTAGATGGAAGTGATGATGTGGAACCTCTACGAAACCGTCTTTCGGAGAAAACAGAACAACAAAGTGTGATGTTGGCCAAAGCAACAGCAGAAAATGTGGACGAGGCTGTACGTGAGCTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCTAAACCTGTCTTCCCAAAACCTCACAAGAAGGGCAATTGCTCTTGGTTAGCAATAAAAAAGATTACTCAACAAGGTGAAAAAATCGGACTACATCATTTTAAACCCATTAGACCGCTGGGTTGTGGAGATACTGGGAGTGTTCACTTGGTGGAACTGGAAGGTTCAGGGGAACTTTATGCTATTAAAGCAATGGACAAGGCTGTAATGTTGAACAGGAACAAGGTTCATAGAGCATGCATTGAAAGAGAAATTATTTCTTATCTGGATCATCCTTTTCTTCCGACTCTGTACACATCATTTCAGACTCCTACACACGTTTGTTTGGTAACAGACTTTTGCGCTGGTGGAGAATTGTATGCATTGCTCGAAAAGCAACCAATGAAAATGTTCAAAGAGGAATCTGCAAGGTTTTATGTTGCTGAGGTTGTCATTGCATTGGAATATCTACACTGCTTAGGAATTATTTATCGGGATCTGAAGCCTGAAAATATTTTAGTTCAAAAGGACGGTCATATTGTATTAGCCGATTTTGATTTGTCATTTTTGACTTCCTCGAAGCCTCAGGTTATAAAGTTTCCTTCACAAAGCAAACAGAGGTCGAAGAAGAAGCAACTGCCACCTGCATTTGTTGCGGAACCGGTTTCGCACTCGAATTCATTTGTTGGAACTGAAGAGTACATTGCTCCTTTGCAGGAAATTATAACTGGTGCTGGCCACACGAGTGCTATTGATTGGTGGACTCTCGGTATATTATTGTATGAATTGCTATATGGACGTTCACCATTTAGGGGAAAGAACAGGCAGAAGACTTTTACCAACATATTGCACAAAGAACTAACCTTCCCGAGTAGTATTCCAGTAAGTCTTCAAGCAAGGCAGATGATAAATGGTTTGCTCCAAAGAGACCCAGCAGCTCGTTTAGGCTCACAAACCGGTGCCAACGAAATCAAACAACATCCTTTTTTCCGTGAAATTAATTGGCCTCTAATCCGATGCATGACACCGCCTCCGCTGGATGTTCCTCTCAAATTGATTGAAAAGGATCCAAATGCAAAGGATATAAAGTGGGAAGATGATGGTGTGCTTACCAGATCAATGGATTTGGAGATTTTCTGA 2478 42.05 MESQSGDLQKVAQDLTDALSTLEHTFVVSDATKPDCPIVYASGGFFTMTGYSSDEVIGRNCRFLQGADTDQNEVDKIRNAVRNGKSYCGRLLNYKKDGSPFWNLLTVTPIKDENGKAIKFIGMQIEVSKHTEGVIDKALRPNGLPQSLIRYDARQKEKALNSIEEVLQTVRHPQPLTRTTSHSSVFKRQESTQSRSDYAEAITTPGRQTYQLDSKVDLSHPGAYGDSSKKFGLSSRLSLMGFKGRSVSTTGSREQKTTIEPVILMTKEIERTDSWDHDERERDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEVLGRNCRFLQGPETDQATVSQIRDAIRELKEVTVQLINYTKTGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDDVEPLRNRLSEKTEQQSVMLAKATAENVDEAVRELPDANLRPEDLWAIHSKPVFPKPHKKGNCSWLAIKKITQQGEKIGLHHFKPIRPLGCGDTGSVHLVELEGSGELYAIKAMDKAVMLNRNKVHRACIEREIISYLDHPFLPTLYTSFQTPTHVCLVTDFCAGGELYALLEKQPMKMFKEESARFYVAEVVIALEYLHCLGIIYRDLKPENILVQKDGHIVLADFDLSFLTSSKPQVIKFPSQSKQRSKKKQLPPAFVAEPVSHSNSFVGTEEYIAPLQEIITGAGHTSAIDWWTLGILLYELLYGRSPFRGKNRQKTFTNILHKELTFPSSIPVSLQARQMINGLLQRDPAARLGSQTGANEIKQHPFFREINWPLIRCMTPPPLDVPLKLIEKDPNAKDIKWEDDGVLTRSMDLEIF 825
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13517015 13525239 - Bpe021536.1 Bpe07g00688 106457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00688 825 CDD PAS 301 401 IPR000014 -
Bpe07g00688 825 ProSiteProfiles PAS repeat profile. 286 359 IPR000014 -
Bpe07g00688 825 Gene3D PAS domain 275 439 - -
Bpe07g00688 825 ProSiteProfiles PAC domain profile. 360 414 IPR000700 -
Bpe07g00688 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Bpe07g00688 825 ProSiteProfiles Protein kinase domain profile. 487 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00688 825 PANTHER BNAA02G07840D PROTEIN 7 824 - -
Bpe07g00688 825 SUPERFAMILY PYP-like sensor domain (PAS domain) 302 401 IPR035965 -
Bpe07g00688 825 CDD STKc_phototropin_like 485 800 - -
Bpe07g00688 825 Gene3D Phosphorylase Kinase; domain 1 486 570 - -
Bpe07g00688 825 CDD PAS 38 127 IPR000014 -
Bpe07g00688 825 ProSiteProfiles PAS repeat profile. 11 84 IPR000014 -
Bpe07g00688 825 TIGRFAM sensory_box: PAS domain S-box protein 311 401 IPR000014 -
Bpe07g00688 825 TIGRFAM sensory_box: PAS domain S-box protein 37 131 IPR000014 -
Bpe07g00688 825 SUPERFAMILY PYP-like sensor domain (PAS domain) 32 124 IPR035965 -
Bpe07g00688 825 SMART pas_2 13 82 IPR000014 -
Bpe07g00688 825 SMART pas_2 288 357 IPR000014 -
Bpe07g00688 825 MobiDBLite consensus disorder prediction 177 197 - -
Bpe07g00688 825 PANTHER FLIPPASE KINASE 1-RELATED 7 824 - -
Bpe07g00688 825 Gene3D Transferase(Phosphotransferase) domain 1 571 790 - -
Bpe07g00688 825 SMART pac_2 88 130 IPR001610 -
Bpe07g00688 825 SMART pac_2 363 405 IPR001610 -
Bpe07g00688 825 ProSiteProfiles PAC domain profile. 85 139 IPR000700 -
Bpe07g00688 825 Pfam PAS domain 32 128 IPR000014 -
Bpe07g00688 825 Pfam PAS domain 309 401 IPR000014 -
Bpe07g00688 825 SUPERFAMILY Protein kinase-like (PK-like) 469 803 IPR011009 -
Bpe07g00688 825 ProSitePatterns Protein kinases ATP-binding region signature. 493 516 IPR017441 GO:0005524
Bpe07g00688 825 Pfam Protein kinase domain 489 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00688 825 Gene3D PAS domain 25 195 - -
Bpe07g00688 825 SMART serkin_6 487 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00688 Bpe12g00162 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00158 Bpe-Chr1:914374 Bpe07g00688 Bpe-Chr7:13517015 6.58E-28 dispersed
Bpe07g00688 Bpe-Chr7:13517015 Bpe08g00129 Bpe-Chr8:678156 0 dispersed
Bpe12g00162 Bpe-Chr12:1210384 Bpe07g00688 Bpe-Chr7:13517015 0 transposed
Bpe14g00766 Bpe-Chr14:5852678 Bpe07g00688 Bpe-Chr7:13517015 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63422 PF00069 Pkinase 1.50E-57 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00688 K20715 - mnt:21396926 1300.03