Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00693 ATGTCTTTCATTAACTTCATTAATCTGGTACGGAAATATGGAAAGCAGATGGAATCATTAGATGCAAGGTCCAAACTTGACTTTGAAGACGAGAGCCTTAGTAGTCCTGCATCCATAGCTGCAAAGAAATATTCCTTTCAGGAGTCATTACACATATCCTCATCTACTAGTAGTCCGCTGACCTTTTTTTCTCAAGACATGAGGAAAAGGGTAATTGATAGTATCAAAATCGTCGTCTTTTCCGCAAAAATCAACATTCTCATGCCTTTTGGGCCCCTGGCAATCTTGGTTTATAACTTATCTGGTCATCATGGATGGGTCTTCTTTTTAAGCTTATTAGGGATCATACCTCTGGCCGAGCGTTTGGGTTATGCAACGGAGCAGCTGGCCTGCTACACCGGAGCCACAGTTGGAGGTCTTCTTAATGCTACTTTTGGAAATGCAACGGAATTGATAATATCTATTTATGCTTTGAAAAGGGGAATGATCCGGGTTGTTCAACAGTCATTACTGGGCTCTATTTTGTCAAACATGTTACTGGTGCTTGGATGTGCATTCTTTGCTGGTGGACTAGTGTTTTCAAAACGAGAACAAGAATTCACTAAGTCATCTGCTACGGTGAACTCTGGATTGCTGCTAATGGCAGTCATGGGTCTTTTATTTCCGGCAGTCCTTCATTCCACTCATACTGAACTCCATTTTGGAAAGTCTGAGTTGGCTCTTTCGAGGTTTAGCAGCTGCATCATGCTGGTGGCATACGCTGCCTATCTTTTTTTCCAGCTGAGAAATGATAAAAATCTCTATGTCCCAGTTGACGAGGTTGAGGTTCAGGCTGAAGAGAATTCTGATGATGAAGATGCACCTGAGATATCTAAATGGGAATCGATAATTTGGTTGACTATTTTGACAGCATGGATTTCGGTCCTCTCAGAATATTTAGTAAATGCCATTGAGGGAGCATCAGTGGCACTGAAAATACCAGTGGCATTCATTAGTGTTATCCTGCTCCCAATTGTCGGGAATGCTGCCGAGCATGCAGGTGCTGTAATGTTTGCCATGAAAGACAAGCTTGACATTTCTTTGGGAGTTGCCATTGGATCCTCAACCCAGATATCTATGTTCGGGATTCCTTTTTGCGTCGTCATCGGTTGGGCTATGGGTCGTCCGATGGACTTAAATTTTCAACTTTTCGAGACAGCCACCCTTCTCATGACTGTCATAGTCGTAGCCTTCATGCTTCAGGACGGTACCTCGAATTACTTCAAAGGATTAATGCTTATTCTTTGCTACCTGATAGTAGCAGCAAGCTTTTTTGTACATATAGATCCATCTTCAGTAGGTTCGGGGCGAGGAGGAGGAGGAAGAGATCGCCATCAGAAAGATAACTCCAGATTCGAAGAGCGCAGTAATTCGGGGCGTTCCAGCCACAGTAACCCCCCTTCTAGGCACCTTTGGGTGGGAAATCTATCTCACAGCATTGGAGAGCATGATCTCACCCGTCACTTTCTACAGTTTGGAGACCTCGACTCGGTCGCTTTTCAGCCTGGTCGTAGCTATGCTTTCATCAATTTCATTAGGGATGATGATGCCATTGCTGCGATGAAAGAGCTTAGTGGTTTTCCCCTTGCCGGAAATCCTCTTAGAATTGAGTTTGCCAAGGCGGATAAACCACCAGCCCCGTCACGAGGTGAAGATTATTCAAAATTTCGAGATGAACAATATCATGGAGCTAAGGGATCTCCTTTCTTGCAGGAGTTTAGAGGGCGTGATGCTAGCCCTGACTCATTTTATGCTGAAAAAACTAAGATGAATGATAGAAATACTGAACCCAGTGAGGTGTTATGGATAGGATTTCCAGTCTCCCTAAAAGTAGATGAAATGAATTTAAGAAAGGCCTTCTCACCGTTTGGTGACATAGAAAAAATCACTACATTTCCTGGTCGAAGTTATGCTTTTGTTCGATTCAGGAGTTTAATATCAGCTAGCAGAGCAAAAGAGACCCTTCAGGGAAAGCTCTTTGGAAATTCTCGTGTCCACATTTGTTTTGCTAGGAATGAATCTGGCTCATCCAATACCGGAAGGAGCTCAGCAAATGCCCCAACTTCGCCAATTTTGAAGTCGAATAGTCGCCAGGGATTTATGGATAACTACCAGCCTGACAATAATTTTGGAAGCATAACTGGAGATCCTGGCATTAGATCTCAATTTTTCTCAAATTTGGAGTCTGAAGATTCTGATTCCTATAATTTTAACAGAAATAGTAGTTTATGGACAGGTGGGGGTGCTGCAACTGAATCAAGGAGATCTGGTGAAATGGAGTCTAAATTTGGTCCATCACCAGATTCTTACAGATATCACAGAAATCCCGCAAATGAGAGACTTGGGCATATGCATGGCCTTCCTCAGAGATTTTCTCAGAACACTTCATTTTCTGAAGATCATTGGGAGTCAAGAGATGATGTCTACCCACACAATCACGAGTCCAAGAAATTGAAGACTGGCTCGTTTCCTCCTGAAAAGGAGCTTCCTGAGTATCCCTTATCTGAATTACACCAAGAAAAGCATGTTTTCCCAAAGTTGTACTCTGATTTTCATCAATCTGAGGCCTTTGATAAGAAGTTTGAGGCTGGACAATTTGGATATCAACAGATTTCTGAACGTCCAATGAAATTAGCTCTACCTCTTGGAGAAACGAATGAACCTTTGAGAGAACCTTATGATTCTTTCTTGGACTCTAATTCTGTCTCATCAAGTACCAACGGCAGAAAGCGTTTTGCTCCTGAATCAGAGCGTCCTTCTTTGAAAGAGTGGAAATGGGAAGGGACTATAGCTAAAGGAGGGACCCCTGTCTGTCGTGCTCGTTGCTTCCCTGTTGGGAAAATCATGGACATGATGCTGCCGGAATTCTTGGACTGCACAGCGAGGACGAGTCTAGACATGCTTTCAAAGCATTACTACGAAGCAGCTTCTGCTTGGGTTGTTTTCTTTGTGCCAGGGGGTGATTCTGAAATTGGATTGTATAATGAATTCATGAATTATCTTGGCGACAAGCAGAGAGCAGCAGTTGCTAAGTTGGATGATGAGACCACTTTGTTTCTTGTACCGCCATCAGATTTCTCTCAGAAAGTACTCAAGGTACCTGGTAAATTGAGCATTTCTGGCGTTATTCTAAGGTTAGATCGTTCAGGTCCAAATTTTATGCCTGAAAATAAAGACTCAAATTTTATGGTATTTCATGGAGGTGCATCATATTCTAAAGAATCGGCTTCTTCGGCTTCTATTCCTCTACTGTCTGATTTCCGTCAAACTGGAGTGAACAATGTTTCTTTGCCGGTGAATACTATTGCAAGTTTATCCGATGCTTATAATGAAGACCATATTCATCAGCAAAATTCGATCGGACAAAACTGGTCTTCCCACCATCGGCAGAATTCAAATCCTGGCATTAGAAATATACCATCACAACCTTCCAAAAGCTCCATTGATTCTATTGTCCAAGACCATCACCAAGGACATATGTCTAGGGAGTTCCAAGAACCAAACTCTAATCGTTTTTCAGGTGGATATTCCAGCCTTCCTTTTACTGGAAACTTGCTGTCAACTCAGGCAGAAACACAATCTGCAGTCTCTTTAACAATGGCGACACCAGCCTTGCAGCCGGAGCAACTAGCACAATTAGCTTCATCTCTACTTGGGCAGCAAAGGCAGGCACAAATTGCCACAAATGTTTCTAGTGGGAAAGATCTAATGCATAGAAATACTTCCGAACACTTGTTTGGAACATCTATGTATTCTTCACAGAATAATCAGGTCAATTCTGGTCTTGCATCATCTCAATTTGGCCAACCCCAGCAATCTCAGAGGCCACATCAGCAGCCGCCAGCCATAGACGTCCGGCAGGATACCACTCAAAGAGAGGGTCAAGCAGTGGCCTCAAGTGGAGGGGAAGAGGCAGAAGCCGATCCACAGAAACGCCTGCAAGCTACATTACAGCTAGCTGCTGCTCTTCTTCAGCAAATTCAACAAGGAAAAGGAAGTTAA 4041 43.08 MSFINFINLVRKYGKQMESLDARSKLDFEDESLSSPASIAAKKYSFQESLHISSSTSSPLTFFSQDMRKRVIDSIKIVVFSAKINILMPFGPLAILVYNLSGHHGWVFFLSLLGIIPLAERLGYATEQLACYTGATVGGLLNATFGNATELIISIYALKRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVFSKREQEFTKSSATVNSGLLLMAVMGLLFPAVLHSTHTELHFGKSELALSRFSSCIMLVAYAAYLFFQLRNDKNLYVPVDEVEVQAEENSDDEDAPEISKWESIIWLTILTAWISVLSEYLVNAIEGASVALKIPVAFISVILLPIVGNAAEHAGAVMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVIGWAMGRPMDLNFQLFETATLLMTVIVVAFMLQDGTSNYFKGLMLILCYLIVAASFFVHIDPSSVGSGRGGGGRDRHQKDNSRFEERSNSGRSSHSNPPSRHLWVGNLSHSIGEHDLTRHFLQFGDLDSVAFQPGRSYAFINFIRDDDAIAAMKELSGFPLAGNPLRIEFAKADKPPAPSRGEDYSKFRDEQYHGAKGSPFLQEFRGRDASPDSFYAEKTKMNDRNTEPSEVLWIGFPVSLKVDEMNLRKAFSPFGDIEKITTFPGRSYAFVRFRSLISASRAKETLQGKLFGNSRVHICFARNESGSSNTGRSSANAPTSPILKSNSRQGFMDNYQPDNNFGSITGDPGIRSQFFSNLESEDSDSYNFNRNSSLWTGGGAATESRRSGEMESKFGPSPDSYRYHRNPANERLGHMHGLPQRFSQNTSFSEDHWESRDDVYPHNHESKKLKTGSFPPEKELPEYPLSELHQEKHVFPKLYSDFHQSEAFDKKFEAGQFGYQQISERPMKLALPLGETNEPLREPYDSFLDSNSVSSSTNGRKRFAPESERPSLKEWKWEGTIAKGGTPVCRARCFPVGKIMDMMLPEFLDCTARTSLDMLSKHYYEAASAWVVFFVPGGDSEIGLYNEFMNYLGDKQRAAVAKLDDETTLFLVPPSDFSQKVLKVPGKLSISGVILRLDRSGPNFMPENKDSNFMVFHGGASYSKESASSASIPLLSDFRQTGVNNVSLPVNTIASLSDAYNEDHIHQQNSIGQNWSSHHRQNSNPGIRNIPSQPSKSSIDSIVQDHHQGHMSREFQEPNSNRFSGGYSSLPFTGNLLSTQAETQSAVSLTMATPALQPEQLAQLASSLLGQQRQAQIATNVSSGKDLMHRNTSEHLFGTSMYSSQNNQVNSGLASSQFGQPQQSQRPHQQPPAIDVRQDTTQREGQAVASSGGEEAEADPQKRLQATLQLAAALLQQIQQGKGS 1346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13556618 13567407 - Bpe021540.1 Bpe07g00693 106462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 816 837 - -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 453 471 - -
Bpe07g00693 1346 SUPERFAMILY RNA-binding domain, RBD 478 686 IPR035979 GO:0003676
Bpe07g00693 1346 TIGRFAM caca2: calcium/proton exchanger 71 438 - -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 446 482 - -
Bpe07g00693 1346 Gene3D - 597 695 IPR012677 -
Bpe07g00693 1346 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 11 453 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 909 929 - -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 1131 1171 - -
Bpe07g00693 1346 PANTHER VACUOLAR CATION/PROTON EXCHANGER 11 453 - -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 1264 1310 - -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 1264 1325 - -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 685 725 - -
Bpe07g00693 1346 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 611 685 IPR000504 GO:0003723
Bpe07g00693 1346 Pfam Sodium/calcium exchanger protein 296 435 IPR004837 GO:0016021|GO:0055085
Bpe07g00693 1346 Pfam Sodium/calcium exchanger protein 106 261 IPR004837 GO:0016021|GO:0055085
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 909 923 - -
Bpe07g00693 1346 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 484 547 IPR000504 GO:0003723
Bpe07g00693 1346 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 624 679 IPR000504 GO:0003723
Bpe07g00693 1346 Gene3D - 447 582 IPR012677 -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 1131 1167 - -
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 754 784 - -
Bpe07g00693 1346 TIGRFAM cax: calcium/proton exchanger 88 438 IPR004798 GO:0006816|GO:0015369
Bpe07g00693 1346 MobiDBLite consensus disorder prediction 816 843 - -
Bpe07g00693 1346 Pfam SPOC domain 933 1047 IPR012921 -
Bpe07g00693 1346 SMART rrm1_1 483 550 IPR000504 GO:0003723
Bpe07g00693 1346 SMART rrm1_1 613 681 IPR000504 GO:0003723
Bpe07g00693 1346 CDD RRM3_Spen 484 553 - -
Bpe07g00693 1346 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 482 554 IPR000504 GO:0003723
Bpe07g00693 1346 Gene3D - 282 439 IPR044880 -
Bpe07g00693 1346 Gene3D - 134 276 IPR044880 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00693 Bpe14g00769 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00905 Bpe-Chr2:7484437 Bpe07g00693 Bpe-Chr7:13556618 1.15E-111 dispersed
Bpe05g00972 Bpe-Chr5:22570936 Bpe07g00693 Bpe-Chr7:13556618 6.45E-07 dispersed
Bpe07g00693 Bpe-Chr7:13556618 Bpe08g01003 Bpe-Chr8:12364956 6.69E-07 dispersed
Bpe06g00821 Bpe-Chr6:18357775 Bpe07g00693 Bpe-Chr7:13556618 0 transposed
Bpe11g00610 Bpe-Chr11:4634247 Bpe07g00693 Bpe-Chr7:13556618 0 transposed
Bpe14g00769 Bpe-Chr14:5875539 Bpe07g00693 Bpe-Chr7:13556618 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00693 - - qsu:112036202 929.858