Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00697 ATGGGTTGCTGTCAATCCTCCTTTGTGACAGAGGCAAACCCAGAGAAGCTCCGGAGCCAACAATCTCACTTGCAGTCTCTGGCTCAGCCACCGACATATGTCGGAAACGGCCCGGATCCCATCGATATCCCGTCTTTCTCTGAATTCTTCTTCTCCGACCTTAAGGCGGCTACCAATAACTTCAGTTCCGACTTCATCGTCTCCGAGAGCGGCGAGAAGGCTCCGAACATTGTCTACAAGGGCCAACTCCAAAACAAAACGTGGATCGCAGTGAAGAAGTTCTCAACAATAGAGTGCCCCGACCCTAAACAGTTTAAGGAAGAGTCTATGCGTGTGGGGAGGTTAAGACATCGGAGATTAGCCAATTTGATTGGGTGTTGCTGTGATGGTGATGAGAGACTACTCGTGGCGGAGTACATTCCCAACGATACTCTTGCCAAACATTTATTCCTTTGGGAGAATCAAGCAATTGAGTGGGCCATGCGTTTGAGAGTGGCTCTTTATGTCGCAGAAGCTTTACGTTACTGCGATTTTGAGGGCTGTCCATTATATCATGGGTTAAATACTTACAGGGTTCTGTTTGATGAGGACGGCGATGCACGACTTTCGTGTTTTGGATTGATGAAATACATTGAGGATGGAGAAAGTGAGGGCGACCCACCACGACCTTTCCATTTGAAAAAGGAGAGGGTGACACCAGAAAGCGTAATTTATGATTTTGGAGCCCTCCTTCTAGAACTGCTAAGTGGCAAGCACATCCCACGAAATCAAGGTCTTGATATGATTCAAGGAAAAACTGTAATTCAAATAATGGACCCACATTTGGGGGGGCAATATTCTACTGAGGAAGCAACTGTAGTTGTTAATCTTGCTTCTCAATGTTTGCAAGATGGACCTACGGATCGGCCTAAAATTAAAGTTCTCGTTGAAACACTTGCTTCGATGCAGAAAAAAATAGATGTTCCATCTTCTGTCATGCTTGGAATGAAGAATCAGTGTGAGGGCCCAATGTCTCTGCAACGTCCTCTATCATCAATGGGGGAGGCCTGTTCAAGAAAGGACCTTACTGCAATCCATCAGATTTTGGTTGCGGCGCACTACAGGGATGATGAACGTTCCAGTGAGTTATCTTTCCAAGAGTGGACGGAACAGATGAGAGATATGCTTGAAGCGCGAAAGCGGGGGGATTATGCATTTCGGGATAAAAAATTCATCACTGCTATAGAATGTTATTCCCAGTTTATAAAGGGAGGCGCTATGGTTTCCCCTACTGTATTTGCACGTAGAAGCCTATGCTTCTTGTTATGTGATCAGCCTGATGCTGCTCTGAGGGATGCTATGCAGGCGCAAGTAATCTCCCCTGATTGGCCCACTGCCTTCTACATGCAGTCAGTGGCTCTTGCAAAGCTAGACATGCACAAAGATGCGGCGGACATGTTGAACGAAGCAGCTACACTGGAAGAGAAGCGACAGCCAGGTGGCCGCAGTTGA 1491 46.81 MGCCQSSFVTEANPEKLRSQQSHLQSLAQPPTYVGNGPDPIDIPSFSEFFFSDLKAATNNFSSDFIVSESGEKAPNIVYKGQLQNKTWIAVKKFSTIECPDPKQFKEESMRVGRLRHRRLANLIGCCCDGDERLLVAEYIPNDTLAKHLFLWENQAIEWAMRLRVALYVAEALRYCDFEGCPLYHGLNTYRVLFDEDGDARLSCFGLMKYIEDGESEGDPPRPFHLKKERVTPESVIYDFGALLLELLSGKHIPRNQGLDMIQGKTVIQIMDPHLGGQYSTEEATVVVNLASQCLQDGPTDRPKIKVLVETLASMQKKIDVPSSVMLGMKNQCEGPMSLQRPLSSMGEACSRKDLTAIHQILVAAHYRDDERSSELSFQEWTEQMRDMLEARKRGDYAFRDKKFITAIECYSQFIKGGAMVSPTVFARRSLCFLLCDQPDAALRDAMQAQVISPDWPTAFYMQSVALAKLDMHKDAADMLNEAATLEEKRQPGGRS 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13586974 13596447 + Bpe021544.1 Bpe07g00697 106466

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00697 496 SUPERFAMILY TPR-like 389 489 IPR011990 GO:0005515
Bpe07g00697 496 Gene3D Phosphorylase Kinase; domain 1 41 139 - -
Bpe07g00697 496 Pfam Protein tyrosine and serine/threonine kinase 78 312 IPR001245 GO:0004672|GO:0006468
Bpe07g00697 496 ProSiteProfiles Protein kinase domain profile. 64 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe07g00697 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 494 - -
Bpe07g00697 496 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 494 IPR045845 GO:0004672|GO:0009742
Bpe07g00697 496 SUPERFAMILY Protein kinase-like (PK-like) 42 319 IPR011009 -
Bpe07g00697 496 Gene3D Tetratricopeptide repeat domain 386 492 IPR011990 GO:0005515
Bpe07g00697 496 Gene3D Transferase(Phosphotransferase) domain 1 141 329 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00697 K14500 BSK; BR-signaling kinase [EC:2.7.11.1] - qsu:112032561 702.59
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00697 Bpe-Chr7:13586974 Bpe14g01328 Bpe-Chr14:10359643 0 dispersed
Bpe07g00697 Bpe-Chr7:13586974 Bpe04g00271 Bpe-Chr4:1757517 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g243 . . . . Bpe07g00697 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag1227 . Lsi10g00824 . . . . . . . . . . . . . . . . . . . . Bhi10g01232 . . . . . . . . . . . . . . . . Cme11g01222
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0024964 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63423 PF07714 PK_Tyr_Ser-Thr 2.20E-17 CL0016 Bpe PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00697 Bpe_Chr07 FPKM 7.707247 0.0 13.966931 11.70048 10.63232 13.825488 10.130357 19.587406 18.540272 24.813868