Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00725 TTTTCGGAGGCACAACGTGGAAACAGTGAAATTGGAAAAGAGAGTTCGATCTGCTCTCCGTCTTTGATCCATACCGGTAATCTTTTAACTGCCGGCATTCCGGCGATGGAAACTCCGCAAGCTGGATCCGAGAAGGACAAAGCAGCCAATTCTTTGTCCTCAACCTCTTCTCCGGTATCGGTTGTCTCCAACTTCTGGAAAGATTTTGATTTAGAGAAAGAGAAAGGAGTGTTGGATGAGCAAGGTCTTCGGATAGCCGAAAACCAAGAAAATAGCTTGAAAAATAGACGAAAGCTTGCTGAAAGTACAAGAGATTTCAGGAAAGCTTCGCCAGAGGAGAAGTTAAATTTATTTAATTCTCTTCTTAAATGTTACCAAGAAGAAGTTGATAACATTACCAAGCGAGCAAAGTTTGGAGAAAATGCTTTCCTTAACATCTATCAAAAACTTTATGAAGCTCCGGATCCTTATCCCGCTATTGCTTCAATATCTGAGCAAGAGGGTAAATTATCTGACATGGAGTCTGAAAATCGGAAAATGAAAGTTGAGCTTGAGGAATTTAGAACAGAATCTTCTCATCTAAAAAATCAGCAGGCAACAATAAGGAGACTTGAAGAACGCAATCGACAATTGGAGCAACAGATGGAAGAAAAAATCAAAGAGATAGTGGAGATCAGGCAACGCAGTTTGGCAGAAGAGAATCAGAAAACATTTGATGTTTTGAAAGAAAGGGAGCAATTACTACAGGATCAATTAAGACAAGCTAAAGAAAGTGTCTCAAACATGCAAAAGATACATGAACTTGCTCAAAGTCAATTATTTGAACTTCGGGCTCAGTCAGACGAAGAGAGGGCAGCTAAACAATCAGAGGTCAATCTTCTGATGGATGAAGTTGAGCGGGCTCAAACAAGGCTTCTAAGCCTTGAAAGGGAGAAGGGACTTCTGCGTTCTCAGTTACAATTTGCTAATGAAGATGGTGGAAATAAGAAAAGTGATAATTTAGATTCCAGCAGTTTCCTCGAGAACTCTCTGAGTGCCAAAGAGAAGATTATCTCTGAATTAAACATGGAACTTCACAGCATTGAGACAACCTTGTCAAGTGAAAGGGAGCAACACATAAATGAAATCAAGATATTGAATGGAATTATAAATGAAAAGGAAACTGCTCTTGATGAAATGAAGAAAGAGCTTCAAGGTAGGCCAACATCAAAATTGGTCGATGACTTGAGAAAAAAAGTTAAAATTTTGCAGGCTGTGGGTTATAACTCGATTGAGGCTGAAGATTGGGAAGCAGCTACTAGTGCTGAAGAGATGAGCAAAATGGAGTCTCTTCTTCTTGATAAAAACAGAAAAATGGAACATGAACTTACACAATTGAAGGTTAAACTTTCTGAAAAAGCATCTTTGCTGGAAACAGCTGAAACCAAGATTTCTGAACTCTCAGAGAAGGTTGCTGAACAACAAAAGTTAATACAGAAGTTGGAAGATGATATACTAAAGGGATATAGCTCCAAAGATCAAAAAGGCACTCTCTTTGATGACTGGAATCTTTCTGAAGTCAGGGGGATGGACCTGCCTGAGAATGCAGACAGAAAAAATCCGTCTACAGATCAAGATCAAAGTTCAATGCTTAAGGTAATTTGCAATCAGCGGGATAGGTTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGCAATTGAAAGAGAAGATAGGGCATCTAACTGTGGAATTGGAAAGGACGAAAGCAGATAATGTCAAACTTTATGGAAAGATTCGTTATGTCCAGGACTATAATCTTGAGAAAGTAGTTTCTAGAGGATCAAAGAAGCATGCAGAGGATCTTGAAGGTGGTTTTGCATCAGATGTTGAATCCAAGTATAAAAAGATATACGAAGAAGATATTAATCCTTTTGCTGCATTTTCGAAAAGGGAAAGGGATCAAAGATACAAGGAGTTGGGTATCAGGGATAAAATCACGCTTAGTAGTGGACGATTTCTCTTGGGAAACAAATATGCTCGAACATTTGCATTTTTCTACACCATCGGATTGCATATCTTAGTCTTCACATGCCTATATCGAATGTCGGCTCTGAGCCATCTTAGGTAA 2112 39.11 FSEAQRGNSEIGKESSICSPSLIHTGNLLTAGIPAMETPQAGSEKDKAANSLSSTSSPVSVVSNFWKDFDLEKEKGVLDEQGLRIAENQENSLKNRRKLAESTRDFRKASPEEKLNLFNSLLKCYQEEVDNITKRAKFGENAFLNIYQKLYEAPDPYPAIASISEQEGKLSDMESENRKMKVELEEFRTESSHLKNQQATIRRLEERNRQLEQQMEEKIKEIVEIRQRSLAEENQKTFDVLKEREQLLQDQLRQAKESVSNMQKIHELAQSQLFELRAQSDEERAAKQSEVNLLMDEVERAQTRLLSLEREKGLLRSQLQFANEDGGNKKSDNLDSSSFLENSLSAKEKIISELNMELHSIETTLSSEREQHINEIKILNGIINEKETALDEMKKELQGRPTSKLVDDLRKKVKILQAVGYNSIEAEDWEAATSAEEMSKMESLLLDKNRKMEHELTQLKVKLSEKASLLETAETKISELSEKVAEQQKLIQKLEDDILKGYSSKDQKGTLFDDWNLSEVRGMDLPENADRKNPSTDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKEKIGHLTVELERTKADNVKLYGKIRYVQDYNLEKVVSRGSKKHAEDLEGGFASDVESKYKKIYEEDINPFAAFSKRERDQRYKELGIRDKITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALSHLR 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13794636 13803590 + Bpe021569.1 Bpe07g00725 106494

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00725 703 Pfam CASP C terminal 472 699 IPR012955 GO:0006891|GO:0030173
Bpe07g00725 703 Coils Coil 351 371 - -
Bpe07g00725 703 Coils Coil 163 228 - -
Bpe07g00725 703 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 58 701 - -
Bpe07g00725 703 Coils Coil 284 325 - -
Bpe07g00725 703 Coils Coil 238 265 - -
Bpe07g00725 703 MobiDBLite consensus disorder prediction 44 58 - -
Bpe07g00725 703 Coils Coil 83 103 - -
Bpe07g00725 703 Coils Coil 544 585 - -
Bpe07g00725 703 Coils Coil 463 497 - -
Bpe07g00725 703 Coils Coil 376 396 - -
Bpe07g00725 703 MobiDBLite consensus disorder prediction 34 58 - -
Bpe07g00725 703 PANTHER HOMEOBOX PROTEIN CUT 58 701 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00725 K09313 CUTL; homeobox protein cut-like - csv:101221135 1074.31
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g346 . . Bda06g00485 . . . . Bma12g00932 . . . . . . . . . . . . . . . . . . . . . . . . Cone16ag0272 . . . . . . . . . . Bpe07g00725 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011821 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00725 Bpe_Chr07 FPKM 3.557652 4.417419 18.025009 17.663052 2.513899 2.199275 2.104764 2.244671 1.701666 1.972359