Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00730 ATGGCTTGGAGGAGGGTGTTGAAGGCTCTACAGGCACTGGTGGCCCACTGTTCTCTCTTTTGCTTCACGCTTCTGCTCGTTTTCAAGCTCGATCACCTTGTTTCCTATAGTTGGTGGGTAATTTTTTTCCCGCTGTGGGCCTTTCATGCAGTCGTTGCTCGAGGAAGGTTCTCATTACCCGCCCCATCAGTTCCACACAATCGCAATTGGGCACCTTGCCATGCTGTTGTTGCCACGCCCTTGCTTATTGCATTTGAATTACTTCTTTGTATATATCTTGAGAGTATATATGTACATGGTTTTCCAGCACTCAGTTTGAAGATTGTCTTTCTTCCAGTATTGGCATTTGAAATGACTATTTTAATTGATAATTTCAGAATGTGTAGGGCTCTTATGCCGGGTGATAATGAAGGCTTGAATGATGAGGCTATATGGGAGACTCTTCCTCACTTCTGGGTTGCAATTTCTATGGTCTTCTTTGTTGCTGCTACTATCTTCACCCTCCTAAAGCTTTGTGGTGATGTTGGTGCCCTTGGCTGGTGGGACTTATTTATAAATTTTTGTATTGCTGAGTGCTTTGCATTTCTTGTCTGTACAAAGTGGTCTAATCCTATTATTCACAGAAATTCTAGCAGTGGAGAAGCAACTTCTTCTTCTATGATTATTAGATATCTTGATTGGGGCAGTGGTTTAATACTCTCCCCCCAGGAAGATGAACAACAAGATAGAATATGTGGCCTTCAAGACATTGGAGGCCATATAATGAAAGTTCCGATTATTGGCTTCCAAATCCTTCTTTGCATGCGCCTAGAGGGAACTCCAGCTAATGCTAAATATATACCACTCCCAGCTCTTTTTTCGCCTCTTTTTCTGCTGCAAGGTGCTGGTGTATTATTTTCAGCATCGATATTGGTGGAGAGGATTGTTCTTCTCCGGCAAAGTGGATTTGGCACTGGGTTGTATTTCAGATTTTCTTCAAAAGCCAATGAATGTTTTGAGTTCTTTCATCGTGGATCAAGGCTTTTGGGTTGGTGGTCAATTGAAGAAGGAAATCGTGAGGAAATGGCCCGATTATTTCATGAAGCGGCATCTGGGTATAATACGTTCTCTGGTTATCCTCCTGAGATTGTCAAAAAAATGACCAAGAAAGATCTTGCTGAGGAGGTCTGGAGGCTTCAAGCTGCTCTTGGCGAACAGACTGAAATCACGAAATACAGTCGTCAGGAGTACGAAAGACTTCAGACTGAGAAGGTGTTATGTCGCGTTTGCTTTGAGAGAGAGATCAGCGATGTCCTTCTTCCGTGTAGGCATCGAATACTTTGCAGTATGTGCTCGGCGAAGTGTAAAAAATGTCCAATTTGCCGAGTCTCTATCGAGGAGATTTTACCTGTTTATGATGTTTAG 1404 42.81 MAWRRVLKALQALVAHCSLFCFTLLLVFKLDHLVSYSWWVIFFPLWAFHAVVARGRFSLPAPSVPHNRNWAPCHAVVATPLLIAFELLLCIYLESIYVHGFPALSLKIVFLPVLAFEMTILIDNFRMCRALMPGDNEGLNDEAIWETLPHFWVAISMVFFVAATIFTLLKLCGDVGALGWWDLFINFCIAECFAFLVCTKWSNPIIHRNSSSGEATSSSMIIRYLDWGSGLILSPQEDEQQDRICGLQDIGGHIMKVPIIGFQILLCMRLEGTPANAKYIPLPALFSPLFLLQGAGVLFSASILVERIVLLRQSGFGTGLYFRFSSKANECFEFFHRGSRLLGWWSIEEGNREEMARLFHEAASGYNTFSGYPPEIVKKMTKKDLAEEVWRLQAALGEQTEITKYSRQEYERLQTEKVLCRVCFEREISDVLLPCRHRILCSMCSAKCKKCPICRVSIEEILPVYDV 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13839610 13844576 - Bpe021574.1 Bpe07g00730 106499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00730 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 465 IPR013083 -
Bpe07g00730 467 ProSiteProfiles Zinc finger RING-type profile. 420 455 IPR001841 -
Bpe07g00730 467 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 467 - -
Bpe07g00730 467 Pfam Transmembrane Fragile-X-F protein 29 292 IPR019396 -
Bpe07g00730 467 SUPERFAMILY RING/U-box 411 462 - -
Bpe07g00730 467 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 467 - -
Bpe07g00730 467 CDD RING-HC_CblA_like 419 455 - -
Bpe07g00730 467 Pfam Zinc finger, C3HC4 type (RING finger) 417 460 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00730 Bpe12g00498 CCT
Bpe07g00730 Bpe12g00498 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00730 Bpe-Chr7:13839610 Bpe12g00090 Bpe-Chr12:648633 1.76E-08 dispersed
Bpe06g00612 Bpe-Chr6:16923612 Bpe07g00730 Bpe-Chr7:13839610 2.00E-06 transposed
Bpe12g00498 Bpe-Chr12:10791233 Bpe07g00730 Bpe-Chr7:13839610 0 wgd
Bpe02g02288 Bpe-Chr2:23648917 Bpe07g00730 Bpe-Chr7:13839610 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00730 - - tcc:18604055 810.061