Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00755 ATGGCGAAGACTGCGACCCCAGGTGGAATTTTGAAGATTCAGGCTGATCCAACGCCGGAATCGTCCTCGGAAGTCTCGGATTTAGTGCTTCAGGTCCTCGATCTTAAAGCCACGGGGAATCGTTACATGCTTACTGCCAGCGATGGAACTATGAAGTTGAAAGCTATTCTACCGTCGAATCTCACTTCCGAGGTGATCTCAGGGAAGATTCAGAATCTAGGTCTTATTCGCATTCTTCATTATTCCCTCAATGACATCCCAAACAAGTCGGAGAAGTATATGATTGTGACTAAATGCGAGGTTGTTTCTCCTGCTCTTGAAATGGAGATTAAGAACGTAGTCAAAAGCGATGAATCTGAATTGTTTCTGACACCAAAACGAGAAAATGACTTTGAGAGTGAAGTGAAAGGAGAAAAAACAGGGATTCTTCTAAAGCCAAAGCCTGAAATGTTTGCAAAATCAGCGGCTCAAATTGTAAATGAACAAAGATCAAACTTGGCCCCAACTGCACGAATGGCCATGACAAGGAGAGTTCATCCTCTTCTTTCATTGAATCCCTACCAAGGCAATTGGACAATTAAAGTTCGTGTTACGAATAAGGAAGCTATGCGTTATTACAAGAATGCCAGGGGAGAAGGATGTGTCTTCAATATCGAATTGACTGATGATGATGAAACCCAAATACAGGCAACAATGTTCAATGAAGCTGCTAGAAAGTTTTATGATAAATTTGAGCTTGGAAAGGTTTATTACATTTCAAAGGGAACTCTAAAGGTTGCTAACAAGAAATTCAGTACAGTGAAAAATGATTATGAAATGACTTTGAATGAGAATTCAGAGGTGGAAGAGGCTATCAACGAAGCTACTTTTGTGCCTGTGACGAAATTCAATTTTGTCCCAATTGATATGTTGGGTCCTTACGTGAATGGAAAAGAACTTGTTGATGTTATTGGAGTGGTTCAAAATGTTTCCCCTGCAATCAGTATTCGAAGGAAGATCAATAATGAAACTGCTCCGAAGCGTGAAATAACTATTGCTGATGAGACGAAAAAAACAGTTGCAGTCTCACTATGGAATGTGCTCGCAACTAATGTGGGGCAGGAGTTACTCGACATGGTGGATCAATCACCCGTAATTGCAATTAAGTCTCTTAAAGTTGGAGATTTTCAAGGTGTATCTCTTTCATCAGTGAGTAAAAGCAAATTGCTAGTAAATCCAGACATACCCGAGGCAAAAAAGTTAAAATTATGGTTTGATTCTGAAGGCAAAGGAATATCAATGGCGTCAGTTGGCTCTAGTTTGGGTGCATCATCCAAGAATGGAGGAAGGTCTATGTATTCTGATCGGACATCTTTGTCTTACATAATCCAAAACCCATCATTAGGGGATGATAAGCCGATGTTCTTCAGCATTAAAGCATATATTAGCTCCATCAAACCTGATCAGACTATGTGGTACCGAGCTTGCAAGACTTGCAACAAGAAGGTGACTGAGGCTATAGGTTCTGGATTTTGGTGTGAAGGTTGCCAGAAAAGTGATGGAGAATGCAGTTTAAGATACATAATGGTAGTTAGAATTTCTGATGCCAGCGGCGAAGTCTATCTCTCTCTCTTCAATGACGAGGCAGAAACAATCATTGGATGCACAGCTGATGAGCTTGACAAAATGAAATCACAAATTGATGAAGAGAATTCATATGAGATGAAATTGAAAGAGGCTACTTGGGTTCCTTATCTATTTAGAGTAAGCGTTTCTCAGAATGAATACAACAATGAGAAGAGGCAGAGGATTACTGCCAGAGCTGTTGCTCCTGTCGATTTTGCTTCTGAATCCAGACTCTTGCTTGAAGAAATCTCAAGTTCAAGAATCTCAAAATGA 1878 40.2 MAKTATPGGILKIQADPTPESSSEVSDLVLQVLDLKATGNRYMLTASDGTMKLKAILPSNLTSEVISGKIQNLGLIRILHYSLNDIPNKSEKYMIVTKCEVVSPALEMEIKNVVKSDESELFLTPKRENDFESEVKGEKTGILLKPKPEMFAKSAAQIVNEQRSNLAPTARMAMTRRVHPLLSLNPYQGNWTIKVRVTNKEAMRYYKNARGEGCVFNIELTDDDETQIQATMFNEAARKFYDKFELGKVYYISKGTLKVANKKFSTVKNDYEMTLNENSEVEEAINEATFVPVTKFNFVPIDMLGPYVNGKELVDVIGVVQNVSPAISIRRKINNETAPKREITIADETKKTVAVSLWNVLATNVGQELLDMVDQSPVIAIKSLKVGDFQGVSLSSVSKSKLLVNPDIPEAKKLKLWFDSEGKGISMASVGSSLGASSKNGGRSMYSDRTSLSYIIQNPSLGDDKPMFFSIKAYISSIKPDQTMWYRACKTCNKKVTEAIGSGFWCEGCQKSDGECSLRYIMVVRISDASGEVYLSLFNDEAETIIGCTADELDKMKSQIDEENSYEMKLKEATWVPYLFRVSVSQNEYNNEKRQRITARAVAPVDFASESRLLLEEISSSRISK 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14079346 14082568 - Bpe021601.1 Bpe07g00755 106524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00755 625 Gene3D - 291 430 IPR012340 -
Bpe07g00755 625 PANTHER REPLICATION FACTOR A 1, RFA1 5 619 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bpe07g00755 625 Pfam OB-fold nucleic acid binding domain 191 277 IPR004365 GO:0003676
Bpe07g00755 625 SUPERFAMILY Nucleic acid-binding proteins 296 424 IPR012340 -
Bpe07g00755 625 CDD RPA1_DBD_A 180 283 - -
Bpe07g00755 625 TIGRFAM rpa1: replication factor-a protein 1 (rpa1) 4 619 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bpe07g00755 625 CDD RPA1_DBD_C 463 620 IPR013955 -
Bpe07g00755 625 Gene3D - 6 115 IPR012340 -
Bpe07g00755 625 SUPERFAMILY Nucleic acid-binding proteins 178 288 IPR012340 -
Bpe07g00755 625 CDD RPA1_DBD_B 313 419 - -
Bpe07g00755 625 Gene3D - 177 286 IPR012340 -
Bpe07g00755 625 Pfam Replication protein A OB domain 309 405 IPR031657 -
Bpe07g00755 625 SUPERFAMILY Nucleic acid-binding proteins 447 620 IPR012340 -
Bpe07g00755 625 Pfam Replication factor-A C terminal domain 468 614 IPR013955 -
Bpe07g00755 625 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-RELATED 5 619 - -
Bpe07g00755 625 MobiDBLite consensus disorder prediction 1 21 - -
Bpe07g00755 625 Pfam Replication factor-A protein 1, N-terminal domain 6 103 IPR007199 GO:0003677|GO:0005634|GO:0006260
Bpe07g00755 625 Gene3D - 431 620 IPR012340 -
Bpe07g00755 625 SUPERFAMILY Nucleic acid-binding proteins 3 108 IPR012340 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00755 Bpe12g00524 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00755 Bpe-Chr7:14079346 Bpe13g01237 Bpe-Chr13:17632853 5.09E-97 dispersed
Bpe12g00524 Bpe-Chr12:11107744 Bpe07g00755 Bpe-Chr7:14079346 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00755 K07466 - mnt:21390529 929.858