Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00763 AAGATGGTTCAGAAACGGCCGTTTGACGATGGAGAACCATTGGAGATATCTTCTAAATTCCCAAGACCACTTGAAGGGAAAGAACGACTAGTTTCATTTTCGGAATCTGTTTTTCCCGAGTATGCGTTGCAGGATCCCCACATTTCAGAGGATCGAGTCGTGAAGGCTGATAGCAAAAGTTATGAGAAGGTTTCTGAGCCTCATGAAAGTATCCAAGACATTGATACTGGTTTGCCTAGCTGCAATTCGAATTCAAATTCTTCTTGGGCTGCCAGCAGTACAAGTGAGGACTCTCAGCTGGTGGAACCCTTTCACCAATCATTCCACCCGGAAGTTTGCACTCATGATCGTCCACTGAGACCATTCGTGTTCCGGGAAGATATATATTCTCTACTTTTACACTATCCTCCTCAGAAACTTGTAGCTATTGGACCCGATCATCAAGCTGAAATTCCACCTTGGAGCTCTCCACCACAGGAGAACTTGTTGGGTCATCTAAATGAAGAGAATATACTAATGGGTAAATGTGTCATTCCGATGCCTGATTTGGACTCATCTTCCAGTTATGGCAATGAAGTTGGACGTGGAAGAACTATTTGCAGCTGTGAAGATGGTAATTCTGTTAGATGTGTCCGTCAACATATAGCAGAAGCCAGAGAAAAGCTCGAAAAAGCTATCTGTCAAGAGAGTTTTGAGGAGCTTGGCTTTTATAACATGGGAGAACAAGCTGGGCAGCAGTGGAGGGAAAAAGATGAACAATTATTTCGCGAAGTTGTATTCTCTAATCCAGCATCACTGGGGAGGAATTTTTGGCAGAGTCTCACTGCTGTCTTCCCATCCCGAACCAAGAAAGAGATTGTTAGCTATTATTTTAATGTTTTTATCCTTCAAAGACGAGCTCAGCAGAATCGAAATGACTCGTTGGATATCGACAGTGACAATGATGAGTGGCAGGGAAGTGATGATTTTGGTGAAAATGAACATGGAATGACAGAGGAAGACGAGGATTCTGCTGTGGAATCTCCAGTATATCATAGCAGACTTGATTACAATCAACACGAGCAAGGTGATTTGCAAGATTGCGATGAAGAATCTGGTGAATTGTTCAACACCCTAGAATTTTCAGGTCATATGTCAAAAATTTCCGACAAATCTGAAGGGAGTTTGCTCAATTATTGCCACTCCAGTCCTACAATTGCACCACAGGACGAAAATCCATGGCCCGAAAGTGGAGATCAAGAGGTGCAGGATGATTCATGCACTTCGTCGGATTTGGGGACTTCACAAGGAACCCAGGTTTGGAAGAACGACCTAAATGGATCGAGCACTAGGGAATCGCAAAACGAATACACACTGGAATCATGCAATAGCAGGGCATGGGATTCCGGGTTTTTATCGAGCTTCAAAACCGAAGTTGACTTCTTGCCAACTTGCAGTGTGATCAAAGAGGTTTTCGGAGAGGATTCGTGTAATAATTACAAGGGGAAAGATGCAACTAGAACTTGA 1506 43.29 KMVQKRPFDDGEPLEISSKFPRPLEGKERLVSFSESVFPEYALQDPHISEDRVVKADSKSYEKVSEPHESIQDIDTGLPSCNSNSNSSWAASSTSEDSQLVEPFHQSFHPEVCTHDRPLRPFVFREDIYSLLLHYPPQKLVAIGPDHQAEIPPWSSPPQENLLGHLNEENILMGKCVIPMPDLDSSSSYGNEVGRGRTICSCEDGNSVRCVRQHIAEAREKLEKAICQESFEELGFYNMGEQAGQQWREKDEQLFREVVFSNPASLGRNFWQSLTAVFPSRTKKEIVSYYFNVFILQRRAQQNRNDSLDIDSDNDEWQGSDDFGENEHGMTEEDEDSAVESPVYHSRLDYNQHEQGDLQDCDEESGELFNTLEFSGHMSKISDKSEGSLLNYCHSSPTIAPQDENPWPESGDQEVQDDSCTSSDLGTSQGTQVWKNDLNGSSTRESQNEYTLESCNSRAWDSGFLSSFKTEVDFLPTCSVIKEVFGEDSCNNYKGKDATRT 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14159799 14161634 + Bpe021609.1 Bpe07g00763 106532

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00763 501 MobiDBLite consensus disorder prediction 49 94 - -
Bpe07g00763 501 MobiDBLite consensus disorder prediction 306 341 - -
Bpe07g00763 501 Coils Coil 208 228 - -
Bpe07g00763 501 MobiDBLite consensus disorder prediction 392 445 - -
Bpe07g00763 501 PANTHER DNA BINDING PROTEIN 2 492 - -
Bpe07g00763 501 MobiDBLite consensus disorder prediction 412 445 - -
Bpe07g00763 501 PANTHER DNA BINDING PROTEIN 2 492 - -
Bpe07g00763 501 MobiDBLite consensus disorder prediction 75 94 - -
Bpe07g00763 501 MobiDBLite consensus disorder prediction 1 21 - -
Bpe07g00763 501 MobiDBLite consensus disorder prediction 49 70 - -
Bpe07g00763 501 CDD SANT 247 294 IPR001005 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00763 - - - qsu:112029647 458.373
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00919 Bpe-Chr4:6129161 Bpe07g00763 Bpe-Chr7:14159799 1.27E-26 dispersed
Bpe07g00763 Bpe-Chr7:14159799 Bpe08g01501 Bpe-Chr8:15704332 1.74E-20 dispersed
Bpe12g00528 Bpe-Chr12:11197430 Bpe07g00763 Bpe-Chr7:14159799 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g612 . . Bda06g00529 . . . . Bma12g00973 . . . . Car10g00208 . . . . . . . . . . . . . . . . . . . . Cone13ag0045 Cone19ag0050 . . . . . Blo15g00329 . . Bpe07g00763 . . . . . . . . . . . Cpe18g00769 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004521 2 2 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 2 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00763 Bpe_Chr07 FPKM 125.269676 135.044495 84.742111 83.039932 101.335091 93.617569 97.975517 60.39518 63.9851 61.964825