Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00772 ATGGCAGATTTCATTGAGGAGCTTCTTCGTGGGAGGTTTGTAGAGGATGATTTTACTCCGGCAATGTTAACTGCTTACCACTGGCAGCAGGTTAGCGTAGCTAACATAAGTTATGAAGAGATCCAAGATATGTTCGGAGGAGTCGTTTGCGGAGGATTATCATGTGATTCTCTGAGAAAACTACCATGCCATGTTTTGATTGAGGAAATCAAACCGGGGCAGAACATTTGCTGTGCAATTTGTTTGCAGGACATTATAGTGGGAGAAACTGCAAGAAGTTTACCCAAATGCAATCACACATTTCACTTGGATTGTGTAGACAAATGGCTGATCAGACATCGCTCATGCCCTATATGCAGACAGGACGTGTAA 372 43.01 MADFIEELLRGRFVEDDFTPAMLTAYHWQQVSVANISYEEIQDMFGGVVCGGLSCDSLRKLPCHVLIEEIKPGQNICCAICLQDIIVGETARSLPKCNHTFHLDCVDKWLIRHRSCPICRQDV 123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14216080 14217441 - Bpe021617.1 Bpe07g00772 106541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00772 123 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 1 122 IPR044523 -
Bpe07g00772 123 SMART ring_2 78 119 IPR001841 -
Bpe07g00772 123 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 123 IPR013083 -
Bpe07g00772 123 SUPERFAMILY RING/U-box 65 123 - -
Bpe07g00772 123 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 1 122 - -
Bpe07g00772 123 Pfam Ring finger domain 78 120 IPR001841 -
Bpe07g00772 123 ProSiteProfiles Zinc finger RING-type profile. 78 120 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00772 Bpe12g00538 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00772 Bpe-Chr7:14216080 Bpe10g00720 Bpe-Chr10:13582888 7.66E-18 dispersed
Bpe06g00140 Bpe-Chr6:2509541 Bpe07g00772 Bpe-Chr7:14216080 7.63E-31 transposed
Bpe13g00399 Bpe-Chr13:11727019 Bpe07g00772 Bpe-Chr7:14216080 2.28E-32 transposed
Bpe12g00538 Bpe-Chr12:11251860 Bpe07g00772 Bpe-Chr7:14216080 3.38E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00772 - - csin:114269922 190.66