Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00778 GAAGCTCCAAAAATGGAGTTTCCTGCAGTTGCTCTCCTGGGTTTTCTTTATTTGGTTTCGTCGATTCATGGGCATGAAAATGGAGCTTGGATTGATGCACATGCAACTTTCTACGGAGGAGGTGATGCTGCTGGTACAATGGGTAAGTACGCACAGTTCATCTTCTTCCTTCATCACAGATCCTCATCAAAGTTCAAGTATCTTTTGTTTTTATTCGCAGGTGGAGCTTGTGGGTATGGAAATCTGTACAGCCAAGGCTATGGAACAGAAACTGCTGCTTTGAGCTCAGCATTGTTCAACGATGGACAAGCCTGTGGAGCTTGTTTTGAGATTAAGTGTGTAAATGACAATAAATGGTGTCTCTCAGGCTCCATTCTGGTCACTGCCACCAATTTTTGCCCACCAAATAACGCCCTTCCTAACAACGCAGGCGGATGGTGTAATCTACCCCAACACCATTTTGATCTTTCTCAGCCCGTCTTCCAGAAAATCGCTCAATATAAAGCTGGAATCGTTCCAGTCTCTTACAGAAGGGTGCATTGTTTGAAGAAGGGAGGAGTGAGATTTACGATCAACGGCCATTCTTACTTCAATCTAGTTTTGATCACAAACGTTGGAGGAGCTGGGGATGTCCATGCAGTTTGGATCAAAGGGTCCAAAACTGGGTGGCAACCAATGTCAAGGAACTGGGGCCAGAACTGGCAAAGCAACGCCTTTTTAGACCGGCAGAGCCTCTCTTTTAAGGTCATTAACAGCGATGGCCGAGCTATAGTGTCCTACAATGTCGCCCCTTCTGGGTGGGCCTTCGGCCAGACCTTCACTGGCCAACAATTTCCTTAA 840 46.31 EAPKMEFPAVALLGFLYLVSSIHGHENGAWIDAHATFYGGGDAAGTMGKYAQFIFFLHHRSSSKFKYLLFLFAGGACGYGNLYSQGYGTETAALSSALFNDGQACGACFEIKCVNDNKWCLSGSILVTATNFCPPNNALPNNAGGWCNLPQHHFDLSQPVFQKIAQYKAGIVPVSYRRVHCLKKGGVRFTINGHSYFNLVLITNVGGAGDVHAVWIKGSKTGWQPMSRNWGQNWQSNAFLDRQSLSFKVINSDGRAIVSYNVAPSGWAFGQTFTGQQFP 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14251584 14252498 + Bpe021623.1 Bpe07g00778 106547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00778 279 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 196 275 IPR007117 -
Bpe07g00778 279 Pfam Lytic transglycolase 91 176 IPR009009 -
Bpe07g00778 279 SUPERFAMILY Barwin-like endoglucanases 29 204 IPR036908 -
Bpe07g00778 279 PRINTS Expansin signature 113 124 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 86 100 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 125 135 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 232 253 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 261 277 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 197 218 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 144 161 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 161 174 IPR002963 GO:0009664
Bpe07g00778 279 PRINTS Expansin signature 185 197 IPR002963 GO:0009664
Bpe07g00778 279 Gene3D - 18 181 IPR036908 -
Bpe07g00778 279 SMART dpbb_1 91 176 IPR007112 -
Bpe07g00778 279 PANTHER EXPANSIN 9 50 - -
Bpe07g00778 279 PANTHER EXPANSIN 74 278 - -
Bpe07g00778 279 Gene3D - 186 278 IPR036749 -
Bpe07g00778 279 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 74 186 IPR007112 -
Bpe07g00778 279 PANTHER EXPANSIN-A15 9 50 IPR002963 GO:0009664
Bpe07g00778 279 SUPERFAMILY PHL pollen allergen 183 275 IPR036749 -
Bpe07g00778 279 PANTHER EXPANSIN-A15 74 278 IPR002963 GO:0009664
Bpe07g00778 279 Pfam Expansin C-terminal domain 187 264 IPR007117 -
Bpe07g00778 279 PRINTS Expansin/Lol pI family signature 261 275 IPR007118 GO:0005576
Bpe07g00778 279 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Bpe07g00778 279 PRINTS Expansin/Lol pI family signature 223 237 IPR007118 GO:0005576
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00778 Bpe-Chr7:14251584 Bpe10g00880 Bpe-Chr10:14579466 6.37E-138 dispersed
Bpe13g01406 Bpe-Chr13:19294928 Bpe07g00778 Bpe-Chr7:14251584 3.27E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00778 - - nnu:104598100 414.461