Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00779 AGTCTTCCCGGCGACAATGGGTTTGACCCACTTGGTCTAGCAGAGGACCCAGAGAATCTCCGGTGGTTCGTCCAAGCGGAACTTGTCAATGGCCGGTGGGCAATGCTGGGTGTGGCCGGAATGTTGCTGCCGGAAGTGTTCACCAAGATCGGAATCCTCAACGTACCCAAGTGGTACGACGCCGGAAAATCCGAATACTTCGCATCGTATTCCACTCTTTTTGTGATCGAGTTCATCTTGTTTCACTACGTCGAGATAAGAAGATGGCAAGATATTAAAAACCCAGGAAGTGTAAATCAAGATCCTATCTTCAAGCAGTACAGCTTGCCGCCGAACGAAGTTGGGTATCCCGGCGGCATTTTCAATCCTCTCAACTTCGCCGCAACCCTCGAAGCCAAAGAGAAGGAGATTGCCAATGGGAGATTGGCGATGTTGGCATTTTTAGGGTTTGTGATTCAGCACAACGTGACAGGACAAGGGCCATTCGACAACCTTTTACAGCACCTATCGGATCCATGGCACAACACCATTGTCCAGACGCTTGGTCAGTAG 552 50.18 SLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGILNVPKWYDAGKSEYFASYSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAATLEAKEKEIANGRLAMLAFLGFVIQHNVTGQGPFDNLLQHLSDPWHNTIVQTLGQ 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14254429 14255054 + Bpe021624.1 Bpe07g00779 106548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00779 183 Pfam Chlorophyll A-B binding protein 1 154 IPR022796 -
Bpe07g00779 183 Gene3D Chlorophyll a/b binding protein domain 1 174 - -
Bpe07g00779 183 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 182 - -
Bpe07g00779 183 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 182 IPR001344 GO:0009765|GO:0016020
Bpe07g00779 183 SUPERFAMILY Chlorophyll a-b binding protein 1 181 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00779 Bpe12g00541 CCT
Bpe07g00779 Bpe12g00541 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00779 Bpe-Chr7:14254429 Bpe11g00893 Bpe-Chr11:6579382 3.62E-46 dispersed
Bpe12g00541 Bpe-Chr12:11278473 Bpe07g00779 Bpe-Chr7:14254429 6.09E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00779 K08910 - jre:108999416 365.925