Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00808 ATGGATCCTCCGCTCGTTAATGAAACTTCATTCTCGGCCGTCAATTCGTCCGTATACAGCTTGGCTGATATTTGGCCGTTCGGTGGAGAAGCCGAAGGTGGTGTGTTGGGACTCCGAATCGGTAATTTGGGTCGGAATCTTGGTGGGTTTGCCGAGGGATCTGGAACTCGTGCTGGGTCAGCGGAGGAATCGACGGTGACTGAGCAAAGTGGCCGCGGAGGGAGGAGGAAGAGGAAGGACGTGAGCTCGGAGGACGAGTCCTCGAAAATGGTTTTCTCCTTTAGCTTCAGTTTCTTGCTCAATGATTCCAATGGTAAACTGATGAAATTGGGAGAATCCAGAGATGAAAATTGTGGCGCAAAAGCTGAAGTAGAAGTTGAAACAAACTCGGCCGATGGGAACAAGCCCGACGAACCAAGCTCCAAGCCGTCCGAGCCACCTAAAGATTATATTCATGTGAGAGCGAGAAGAGGCCAAGCAACCGATAGCCACAGTCTAGGAGAAAGAGCGAGAAGAGAGAAAATCAGCGAGAGAATGAAAATTCTCCAAGAGTTGGTGCCGGGATGTAACAAGGTCATAGGAAAGGCACACGTTCTCGATGAGATTATCAATTACATTCAATCTCTGCAGCGTCAAGTCGAGTTCCTGTCCATGAAGCTCGAAGCAGTTAATTCGAGAATGAAGGCGATAGAATGCTATGCTACCAAGGATAGTGGAGTGCAGCCATTTGATGGTGCAGGAATGGTATATGGGTGGCAGGCAATACCGAGAGAGTATGGTCAAGGCTTGCAGCATGAATGGTTGCATATGCAAATTGGCGATGGTTTTGAAAGAGCAAATTAA 843 48.4 MDPPLVNETSFSAVNSSVYSLADIWPFGGEAEGGVLGLRIGNLGRNLGGFAEGSGTRAGSAEESTVTEQSGRGGRRKRKDVSSEDESSKMVFSFSFSFLLNDSNGKLMKLGESRDENCGAKAEVEVETNSADGNKPDEPSSKPSEPPKDYIHVRARRGQATDSHSLGERARREKISERMKILQELVPGCNKVIGKAHVLDEIINYIQSLQRQVEFLSMKLEAVNSRMKAIECYATKDSGVQPFDGAGMVYGWQAIPREYGQGLQHEWLHMQIGDGFERAN 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14414093 14415598 + Bpe021653.1 Bpe07g00808 106577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00808 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 159 209 IPR011598 GO:0046983
Bpe07g00808 280 SMART finulus 165 215 IPR011598 GO:0046983
Bpe07g00808 280 Coils Coil 206 226 - -
Bpe07g00808 280 Pfam Helix-loop-helix DNA-binding domain 163 210 IPR011598 GO:0046983
Bpe07g00808 280 CDD bHLH_AtBPE_like 149 227 - -
Bpe07g00808 280 MobiDBLite consensus disorder prediction 125 149 - -
Bpe07g00808 280 Gene3D - 156 232 IPR036638 GO:0046983
Bpe07g00808 280 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 1 279 - -
Bpe07g00808 280 MobiDBLite consensus disorder prediction 53 84 - -
Bpe07g00808 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 227 IPR036638 GO:0046983
Bpe07g00808 280 MobiDBLite consensus disorder prediction 69 84 - -
Bpe07g00808 280 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 279 IPR024097 GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00808 Bpe12g00567 CCT
Bpe07g00808 Bpe12g00567 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00808 Bpe-Chr7:14414093 Bpe10g00365 Bpe-Chr10:11243759 5.76E-53 dispersed
Bpe12g00567 Bpe-Chr12:11510494 Bpe07g00808 Bpe-Chr7:14414093 5.09E-143 wgd
Bpe13g00471 Bpe-Chr13:12200788 Bpe07g00808 Bpe-Chr7:14414093 2.16E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21668 PF00010 HLH 7.00E-08 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00808 - - csv:101215588 343.969