Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00817 ATGGCGGTTCAGATACCCAGTAGACAGCTTTTCATAGATGGAGAATGGAGGGAACCAGTTCTTAAGAAACGCATCCCCATCATCAATCCTGCCACAGAAGAAATTATCGGTCTGTCTCTCTCTCTATCCTCTCTTTTTCCGGCTAAATTTTTAAGTTTGATCTGTGAATCTATGATTTGTGCTTTAGGGGATATCCCTGCAGCTACTGCGGAGGATGTAGATATAGCTGTAAATGCAGCTAGAAGAGCCCTCGACAAGAAAAAGGGGGGTGAATGGGCCTCTTCTTCTGGTGCTTTTCGTGCGAAGTATTTACGCTCCATTGCTGCCAAGGTAGCGGAGAGGAAATCCGAATTGGCAAAGCTCGAAGCGATTGACGGTGGAAAACCTTTGGACGAAGCTGCATGGGATATGGATGATGTGGCCGGGTGTTTTGAGTACTATGCAGACCTTGCTGAAGCCTTGGATGCTATGCCGAAGACACCACTTTCTATCCCTATGGACACATTCAAGAGCTATGTTCTTAAGGAACCCATTGGAGTGGTTGGGTTGATTACTCCATGGAATTATCCTCTACTGATGGCTACATGGAAAGTGGCTCCTGCATTGGCTGCTGGATGTGCTGCGATACTCAAGCCATCCGAACTTGCTTCCGTGACTTGTTTGGAGCTGGCTGAAATATGTAGCAGTATCGGCCTTCCTCCTGGTGTTCTCAATGTTTTGACTGGTTATGGTCCCGAAGCTGGTGCTCCTTTGGCAACTCATCCGCATGTTGACAAGATTGCATTTACAGGCAGCACGCTTACAGGGAGCAAGATAATGGCTTCTGCAGCTCAAGTGGTCAAGCCTGTTTCACTTGAGCTTGGTGGAAAAAGTCCAATTATTGTTTTTGAGGACGTTGACTTGGAGAAAGCTGCCGAATGGACAGCTTTCGGTTGCTTTTGGACAAATGGTCAGATTTGCAGTGCAACGTCGCGTCTTCTTATACATGAAAGTATTGCTAGTGAATTTTTGGAGAAGCTGGTACAGTTGTGCAGAAACATTAAAATATCAGATCCCTTGGAAGATGGTTGTCGGCTTGGCCCTGTCGTTAATGGAGGGCAGTATGAGAAAATATTGAATTTCATATCAACTGCCAAGAGTGAAGGTGCAACTATTCTCTCCGGCGGGGGTCGTCCTCAGCATCTCAAGAAAGGGTTCTTTATTGAACCGACCATCGTAACCAACGTGACGACATCTATGCAAATTTGGAGAGAAGAAGTTTTTGGACCAGTAATTTGTGTCAAAACGTTCAGAACCGAAGACGAAGCAATTGAATTAGCAAATGATAGCCAATATGGATTAGGTTCTGCTGTAATCTCAAATGATCTAGAAAGGTGTGATCGTATCTCAAAGGCTTTGGAGGCAGGTATTGTATGGATCAATTGCTCCCAACCATGTTTCTGTCAAGCCCCGTGGGGAGGCACCAAGCGTAGCGGCTTCGGTCGTGAATTAGGCCAATGGGGACTCGATAATTATCTGAGCGTGAAGCAGGTTACACAGTACGTCTCCAATGAGCCATGGGGGTGGTATCAAGCTCCTTCAAAACTATGA 1590 45.97 MAVQIPSRQLFIDGEWREPVLKKRIPIINPATEEIIGLSLSLSSLFPAKFLSLICESMICALGDIPAATAEDVDIAVNAARRALDKKKGGEWASSSGAFRAKYLRSIAAKVAERKSELAKLEAIDGGKPLDEAAWDMDDVAGCFEYYADLAEALDAMPKTPLSIPMDTFKSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCAAILKPSELASVTCLELAEICSSIGLPPGVLNVLTGYGPEAGAPLATHPHVDKIAFTGSTLTGSKIMASAAQVVKPVSLELGGKSPIIVFEDVDLEKAAEWTAFGCFWTNGQICSATSRLLIHESIASEFLEKLVQLCRNIKISDPLEDGCRLGPVVNGGQYEKILNFISTAKSEGATILSGGGRPQHLKKGFFIEPTIVTNVTTSMQIWREEVFGPVICVKTFRTEDEAIELANDSQYGLGSAVISNDLERCDRISKALEAGIVWINCSQPCFCQAPWGGTKRSGFGRELGQWGLDNYLSVKQVTQYVSNEPWGWYQAPSKL 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14464866 14469110 - Bpe021662.1 Bpe07g00817 106586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00817 529 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 1 37 - -
Bpe07g00817 529 Pfam Aldehyde dehydrogenase family 62 511 IPR015590 GO:0016491
Bpe07g00817 529 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 285 292 IPR029510 GO:0016491
Bpe07g00817 529 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 37 - -
Bpe07g00817 529 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 61 526 - -
Bpe07g00817 529 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 61 526 - -
Bpe07g00817 529 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 509 IPR016162 GO:0016491
Bpe07g00817 529 CDD ALDH_F10_BADH 27 513 - -
Bpe07g00817 529 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Bpe07g00817 529 SUPERFAMILY ALDH-like 5 513 IPR016161 GO:0016491
Bpe07g00817 529 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 293 484 IPR016163 GO:0016620
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00817 Bpe12g00577 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00817 Bpe-Chr7:14464866 Bpe08g00466 Bpe-Chr8:2996513 1.40E-131 dispersed
Bpe12g00577 Bpe-Chr12:11564836 Bpe07g00817 Bpe-Chr7:14464866 0 wgd
Bpe13g01458 Bpe-Chr13:19861523 Bpe07g00817 Bpe-Chr7:14464866 8.10E-111 wgd
Bpe13g00279 Bpe-Chr13:10685412 Bpe07g00817 Bpe-Chr7:14464866 4.24E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00817 K00130 - tcc:18603822 877.856