Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00827 ATGCTGTCGAGATCTTGCCTAAGTTTGTTGGAACTGGCATCGTCTGGGGATCACATGTTGAACCTACCTCTAACTCCGAGGTCTCTTCCACGTGTAATCACCGTCCCCGGAATACTCTCCGAAGTCGACGGAGACGGAATCAACGACGAAGATTCCGATCTGATTTCTTTGAAATCCCGAGCAAAGAAAATCATAGTAGCTAACTTTCTCCCTCTACATGCTACAAAAGCTTTAGTCTCCGGAAAATGGTGTTTCAGTCTTGACGAGGACTCCCTTTTGTTACAATTGAAAGATGGATTTTCGTCAGAGATCGATGTTATTTACGTTGGATCACTTCAAATCGAAGTGGATTTGATCGAACAAGAAGAAGTTTCTCAGAAATTGTTCGAGGATTTTAATTGCGTTCCTACGTTTATTCCCCCGGATCTTCACAGACAGTTCTACCATGGATTTTGTAAGCAGCATTTGTGGCCCCTCTTCCACTGTATGCTGCCTTTATCCCCCGATCATAGTTCTCGTTTCGACCGACAGCTATGGCAGGCTTATGTTTCGGTTAATAAAATATTTGCAAATAAAGTAATGGAGGTGATCAATCCCGAAGAAGATTATGTGTGGGTTCATGATTATCACCTTATGGTTCTTCCGACTTTCTTGAGGAAGCATTTGAGTCGGGTTAAGCTCGGATTCTTTCTTCACAGCCCTTTTCCTCCATCGGAAATATATCGAACTCTTCCCGTCAGAGATGAGATTTTGAAAGCATTACTGAATGCAGACCTGATCGGTTTTCATACTTTCGATTATGCCCGCCACTTTCTCTCGTGTTGTAGTAGAATGCTAGGGCTCGGATATGAATCTAAGCGTGGGTATATCGGGCTCGAGTATTTTGGCCGTACAATATATATAAAGATTTTACCCGTTGGGATTCATATGGGTCGACTCGAGTCTGCATTGAACAATCCGACCTCATCAATGAAGGCGAAAGAGATCCAGAAGTATCTCCATGGGAAAAAACTCATTATTGGTGTTGATGATATGGACATATTCAAAGGTATTGGCTTGAAGTTATTAGCTTTCGAGCAACTCTTCTATCGGAATCCGGATTTGCGAAGCAAAATTGTGCTCGTCCAGATCATCAATCCTGCACGAAGCACTGGAAAAGACGTTGAAGAAGCCAAAAAGGAGACTTACTCGATAACTGAGAGGATCAACATGGCTTTTGGCTCCCCTGGCTATTTACCGGTCATCTTAATTGATCGTCCTATTCCCTTCCAAGAAAAGACGACATATTATGCCCTGGCAGAGTGTTGTATCGTGAATGCCGTGAGGGACGGTATGAACTTGATTCCGTACGAGTATATTGTTTGCAGACAAGGAACTCCAAAAATGGACATAGCATTAGACATCGATTCGAATTTGCCTCGGACGAGTACACTTGTCGTGTCGGAGTTCATTGGTTGCTCGCCATCTTTGAGTGGAGCCATCAGAGTGAACCCGTGGGATGTCGATGCAGTTGCTGATGCTCTAAATATGGCCATCTCGATGCCTAATTTGGAGAAGCAGTTGAGGCATGAAAAGCATTACCGTTATGTTAGCTCTCACGATGTCGCATTTTGGGCTCAGAGTTTTATGCAAGATTTGGAGCGAGCTTGCAAAGAACATTACAACAAACGTTGTTGGGGAATTGGGTTCGGTTTGGGTTTCAGAATATTGTCTCTTTCTCCGAGTTTTAGGAAGCTTTCTATTGACCATATTGTCTCAGCTTATAAGCGGACTAGTAGGAGAGTGATGTTTTTGGATTACGACGGGACTGTAGTTCCTCAATCGTCGATCGAGAAAAGTCCATCTCTGGAAGTCATTTCCGTGCTGAATAATCTATGTGCAGACCCAAAAAACACAGTGTTTATTGTAAGTGGGAGGGAGAAAAGCTCTCTTGACTCATGGTTTGTTTCGTGCGAGAATCTCGGTATAGCAGCCGAACATGGATTCTTCTTAAGGTGGAGTAAGAAGTCGAGATGGGAAGTCTGTGCTGGAACAGCTGATTTCAGTTGGAAAAGGATTGCCGAACCGGTGATGAAATTATACACCGAGGCAACAGACGGGTCATACATCGAGACCAAAGAAAGTGCATTAGTCTGGCACCATCGAGATGCCGACCCTGATTTCGGGTCGTGCCAAGCAATGGAGCTCTTGGACCATCTCGAAAATGTGCTTGCAAATGAGCCGGTTGTCGTGAAGAGAGGCCAGCATATCGTCGAAGTAAAGCCACAGGGAGTGACAAAAGGATTTGTAGCAGAGAAAGTACTGTCCGGAATGATTGGCAAGGAGAAGCCACCCGATTTCGTGATGTGTATAGGCGATGATAGATCAGATGAAGACATGTTTGAGAGCATATTAAGCACTTCCTACAATCCTGCACCCGAGATCTTTGCATGCACTGTTGGTCAGAAACCGAGCAAGGCCAAATACTATCTCGACGATACATCGGATGTGGTGAAACTGCTTCAGGGTCTCTCCATCGCATCCAATCGGAAGTCGAGGTGGAGCCCAGAGGCTCAAGTTGTCTTCACCAACGCTGTT 2577 44.63 MLSRSCLSLLELASSGDHMLNLPLTPRSLPRVITVPGILSEVDGDGINDEDSDLISLKSRAKKIIVANFLPLHATKALVSGKWCFSLDEDSLLLQLKDGFSSEIDVIYVGSLQIEVDLIEQEEVSQKLFEDFNCVPTFIPPDLHRQFYHGFCKQHLWPLFHCMLPLSPDHSSRFDRQLWQAYVSVNKIFANKVMEVINPEEDYVWVHDYHLMVLPTFLRKHLSRVKLGFFLHSPFPPSEIYRTLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLGYESKRGYIGLEYFGRTIYIKILPVGIHMGRLESALNNPTSSMKAKEIQKYLHGKKLIIGVDDMDIFKGIGLKLLAFEQLFYRNPDLRSKIVLVQIINPARSTGKDVEEAKKETYSITERINMAFGSPGYLPVILIDRPIPFQEKTTYYALAECCIVNAVRDGMNLIPYEYIVCRQGTPKMDIALDIDSNLPRTSTLVVSEFIGCSPSLSGAIRVNPWDVDAVADALNMAISMPNLEKQLRHEKHYRYVSSHDVAFWAQSFMQDLERACKEHYNKRCWGIGFGLGFRILSLSPSFRKLSIDHIVSAYKRTSRRVMFLDYDGTVVPQSSIEKSPSLEVISVLNNLCADPKNTVFIVSGREKSSLDSWFVSCENLGIAAEHGFFLRWSKKSRWEVCAGTADFSWKRIAEPVMKLYTEATDGSYIETKESALVWHHRDADPDFGSCQAMELLDHLENVLANEPVVVKRGQHIVEVKPQGVTKGFVAEKVLSGMIGKEKPPDFVMCIGDDRSDEDMFESILSTSYNPAPEIFACTVGQKPSKAKYYLDDTSDVVKLLQGLSIASNRKSRWSPEAQVVFTNAV 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14522840 14525580 - Bpe026082 Bpe07g00827 106596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00827 859 CDD GT20_TPS 64 547 IPR001830 GO:0003824|GO:0005992
Bpe07g00827 859 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 848 IPR001830 GO:0003824|GO:0005992
Bpe07g00827 859 Pfam Trehalose-phosphatase 597 828 IPR003337 GO:0003824|GO:0005992
Bpe07g00827 859 Pfam Glycosyltransferase family 20 62 547 IPR001830 GO:0003824|GO:0005992
Bpe07g00827 859 SUPERFAMILY HAD-like 594 836 IPR036412 -
Bpe07g00827 859 TIGRFAM T6PP: trehalose-phosphatase 593 836 IPR003337 GO:0003824|GO:0005992
Bpe07g00827 859 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 848 - -
Bpe07g00827 859 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 551 - -
Bpe07g00827 859 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 596 795 IPR006379 -
Bpe07g00827 859 Gene3D - 593 716 IPR023214 -
Bpe07g00827 859 Gene3D - 722 850 IPR023214 -
Bpe07g00827 859 CDD HAD_TPP 595 832 - -
Bpe07g00827 859 Gene3D Glycogen Phosphorylase B; 56 314 - -
Bpe07g00827 859 Gene3D Glycogen Phosphorylase B; 315 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00231 Bpe-Chr7:1639176 Bpe07g00827 Bpe-Chr7:14522840 0 dispersed
Bpe07g00827 Bpe-Chr7:14522840 Bpe11g01763 Bpe-Chr11:14021187 0 dispersed
Bpe07g00827 Bpe-Chr7:14522840 Bpe10g00831 Bpe-Chr10:14308752 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00827 K16055 - rcu:8289035 1374.38