Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00855 ATGGCTTCTTCAAGCTCATACAATTCACCATGTGCTGCCTGCAAGTTCCTGAGGAGAAAATGCATGCCGGGGTGCATATTTGCGCCGTACTTCCCGCCGGAGGAGCCTCAGAAATTCGCCAACGTTCACAAGATATTCGGAGCAAGCAACGTCACGAAGCTCCTCAACGAGATCCTCCCCAACCAACGGGAGGACGCCGTCAACTCCCTCGCCTACGAGGCTGAGGCAAGGGTACGGGACCCAGTCTACGGCTGCGTCGGAGCCATCTCCTTCCTCCAACGGCAAGTTCAACGCCTCCAGAAGGAGCTCGACGCGGCCAACGCCGACCTCATCCGCTACGCTTGCGCAGATATCCCTTCCGCAGTCTCTGCACAGTCTGGAGTGAGTATTTTCAGTCTAAGAGGAGGGAACGGAGGAGGAGGAGGAAGCGGTGGCGGCGGAGGAGGTTACTATCAACCTCCTCCATTCCCTCTCCCCTACCCACTGCCTTGGAACGATAACAGCGACGTCCATGGCGGAGGAGGAGGAGGAGGAGGAGGACAAGGCCAAAGCAGCATCGCACTATTGAAGTATCAAGGGAAATCAAAACCTACCATGAAGAAATAG 606 56.27 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNEILPNQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLIRYACADIPSAVSAQSGVSIFSLRGGNGGGGGSGGGGGGYYQPPPFPLPYPLPWNDNSDVHGGGGGGGGGQGQSSIALLKYQGKSKPTMKK 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14679814 14681152 - Bpe021698.1 Bpe07g00855 106624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00855 201 MobiDBLite consensus disorder prediction 160 201 - -
Bpe07g00855 201 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bpe07g00855 201 Coils Coil 89 116 - -
Bpe07g00855 201 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Bpe07g00855 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 179 - -
Bpe07g00855 201 PANTHER ELONGATED PETIOLULE 1 1 179 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00855 Bpe13g00250 CCT
Bpe07g00855 Bpe12g00665 CCT
Bpe07g00855 Bpe13g00250 ECH
Bpe07g00855 Bpe12g00665 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00855 Bpe-Chr7:14679814 Bpe13g00079 Bpe-Chr13:4520189 3.93E-50 dispersed
Bpe15g01197 Bpe-Chr15:20728436 Bpe07g00855 Bpe-Chr7:14679814 1.33E-18 dispersed
Bpe13g00250 Bpe-Chr13:10454390 Bpe07g00855 Bpe-Chr7:14679814 2.52E-77 transposed
Bpe11g01519 Bpe-Chr11:11281461 Bpe07g00855 Bpe-Chr7:14679814 6.47E-72 wgd
Bpe12g00665 Bpe-Chr12:12311949 Bpe07g00855 Bpe-Chr7:14679814 1.63E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21673 PF03195 LOB 4.20E-42 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00855 - - tcc:18604002 263.077