Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00865 GACCTGGCTAGAACCCATGGTCCCCTCCTGCTGCTTTGGCTCGGCCGTGTCCCAGTCCTCGTTGCTTCATCCGCCGAGACGGCTCGCGAGATCTTGAAAACTCACGACCTAGTTTTTGCAAACCGAGCCACATCCGCCATGGCCAAGAAGCTCATATACAATTGCAGAGACGTGGCTTTCGCTCCATATGGAGAGTACTGGAGGCAGATGAGAAGAGTCTGCGTCCTTCATCTTCTAAGCACCAAAATGATTCAGTGTTCTCGCCAAGTTAGAGAAGAAGAAGTAAACTTAATGATCGGCAAGATTGAAAAAACCGCGTCTTCTTCTTCTTCGTCGCCTGTAAATTTGAGTGAAATGTTTATGAAGCTGACAAACGACATCATTAGAGACGGAAAAGTCCAAGTTCTTTTGCCGAGAGAAGCAGGGTATGCCATTCAGCTCTCTAACACAACTTTGCTCGATGTTCGTCCCTCAACTGAGCGCACAAAGGCGTGGGTTAAGAGTTCGACCTGGGTGCCCATATTTGATGTTGATAATACGTTTGATGCCGGAGCTATATCTAGAAAAGTCACAAGCTTCATGATGGGAGGTTGGTGGAGTGGCGTGCCCACGTTGTCCTACAATAGTAAGTTCTTACCAGAAGTTGAGGCCAAGTTTCCGAAAGATACTGACCTGATTGTTTCTTGCCAAAAAGGATTAAGATGGTTGTATGAAATCAAATGTATATTTTATAGCATTTATATTATAATCCGACAGCCTTTATGCAGATCTCTAGCTGCCTGTGAGCTTCTTTATAATGCTGGCTACAGAAACCTTTTGTGGATTGAAGGGGGATTTGAAGCCGCTGAAGAAGAGGATCTAATCAGAGAAGGTCCTGAGCCGCTTAAATTTGCTGGGATTGGCGGGCTCTCAGAGTTCCTTGGTTGGACTGATCAACAACGAGCTGCCGCTGCGAGGGAAGGTTGGGGATATCGATTAGTGTTCTCTGCCAGACTGCGAGTTGCTTTTGGTCAGAAACAGGGTGGAAAAAGTGTTCATGACAAGAACACATTTCACAAGCTTCTCCGAGAATTAGATGATTTCTTAGGAGGATTCAGCATAGCAGATTTCTTCCCGTGGCTGGAGTGGATCAACAATTTCAATGGTTTAGGAGCAAGATATGACAAAAATTTCAGAGAGCTGGACAAGTTCTACGACAGAACGATCGAAGAACACAGTGACCCTCGTCAGCCAAATGACGAAGACGATGACATTGTCGACGTTCTTCTTCGGATTCAGAAAGATCCAAATCGATCCATTCCCCTCACCAACAATCAAATCAAGGCCGCCATTAACACACTGACATTGATAATGGCGGAGCTGATTAAGAATCCACCGGCGATGAAAAAAGCACAAGATGAGATCAGAGGCATCATGAAAGGGAAAACGAAGGTGGAAGAGAGAGATCTGGTTATTTACAACAGAGAAACTGATAGGAGTCGTGGGTTTGGTTTTGTGACTATGAGTACTGTTGAAGAAGCTGATAAAGCTGTGGATATGTTCAATCGATTTGACGTGGGAGGAAGGCTATTGACTGTCAACAAGGCAGCTCCACGAGGAGAGAGGATCGAACAACCCCCTCGCACATTTGACCGTTCTTTTAGAATATATGTTGGTAATTTGCCATGGGACGTGGATGGAGCTCGCCTGCAGCAACTTTTCAGTGAGCATGGTAATGTGGTGGATGCGCGAGTTGTCTTCGATCGGGAAACTGGGCGTTCTCGTGGGTTTGGATTCGTCGTAATGTCCGATGAATCCGGAATGAACGATGCCATTGAGGCACTTGATGGACAGAGTCTGGGAGGCAGATCTATAAGAGTAAGCGTTGCAGAGGAAAAACCGAGGCGTTCCTTTTGA 1896 46.04 DLARTHGPLLLLWLGRVPVLVASSAETAREILKTHDLVFANRATSAMAKKLIYNCRDVAFAPYGEYWRQMRRVCVLHLLSTKMIQCSRQVREEEVNLMIGKIEKTASSSSSSPVNLSEMFMKLTNDIIRDGKVQVLLPREAGYAIQLSNTTLLDVRPSTERTKAWVKSSTWVPIFDVDNTFDAGAISRKVTSFMMGGWWSGVPTLSYNSKFLPEVEAKFPKDTDLIVSCQKGLRWLYEIKCIFYSIYIIIRQPLCRSLAACELLYNAGYRNLLWIEGGFEAAEEEDLIREGPEPLKFAGIGGLSEFLGWTDQQRAAAAREGWGYRLVFSARLRVAFGQKQGGKSVHDKNTFHKLLRELDDFLGGFSIADFFPWLEWINNFNGLGARYDKNFRELDKFYDRTIEEHSDPRQPNDEDDDIVDVLLRIQKDPNRSIPLTNNQIKAAINTLTLIMAELIKNPPAMKKAQDEIRGIMKGKTKVEERDLVIYNRETDRSRGFGFVTMSTVEEADKAVDMFNRFDVGGRLLTVNKAAPRGERIEQPPRTFDRSFRIYVGNLPWDVDGARLQQLFSEHGNVVDARVVFDRETGRSRGFGFVVMSDESGMNDAIEALDGQSLGGRSIRVSVAEEKPRRSF 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14749891 14768237 + Bpe021708.1 Bpe07g00865 106634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00865 631 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 547 625 IPR000504 GO:0003723
Bpe07g00865 631 Gene3D Cytochrome P450 310 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe07g00865 631 Gene3D - 130 288 IPR036873 -
Bpe07g00865 631 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 447 531 IPR000504 GO:0003723
Bpe07g00865 631 SUPERFAMILY Cytochrome P450 1 129 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe07g00865 631 CDD RRM_HP0827_like 548 624 - -
Bpe07g00865 631 SUPERFAMILY RNA-binding domain, RBD 539 629 IPR035979 GO:0003676
Bpe07g00865 631 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 144 281 IPR036873 -
Bpe07g00865 631 ProSiteProfiles Rhodanese domain profile. 146 291 IPR001763 -
Bpe07g00865 631 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 465 524 IPR000504 GO:0003723
Bpe07g00865 631 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 549 619 IPR000504 GO:0003723
Bpe07g00865 631 SUPERFAMILY Cytochrome P450 322 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe07g00865 631 SUPERFAMILY RNA-binding domain, RBD 484 545 IPR035979 GO:0003676
Bpe07g00865 631 Pfam Cytochrome P450 325 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe07g00865 631 Pfam Cytochrome P450 2 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe07g00865 631 Gene3D - 532 630 IPR012677 -
Bpe07g00865 631 SMART rhod_4 136 288 IPR001763 -
Bpe07g00865 631 SMART rrm1_1 448 527 IPR000504 GO:0003723
Bpe07g00865 631 SMART rrm1_1 548 621 IPR000504 GO:0003723
Bpe07g00865 631 Gene3D Cytochrome P450 1 129 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe07g00865 631 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 252 334 IPR044664 -
Bpe07g00865 631 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 126 243 IPR044664 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00865 Bpe12g00685 CCT
Bpe07g00865 Bpe12g00685 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00865 Bpe-Chr7:14749891 Bpe12g00675 Bpe-Chr12:12392523 1.24E-22 dispersed
Bpe15g01048 Bpe-Chr15:19819981 Bpe07g00865 Bpe-Chr7:14749891 6.30E-19 dispersed
Bpe07g00863 Bpe-Chr7:14741945 Bpe07g00865 Bpe-Chr7:14749891 2.80E-14 proximal
Bpe04g00562 Bpe-Chr4:3564771 Bpe07g00865 Bpe-Chr7:14749891 1.09E-10 transposed
Bpe04g01274 Bpe-Chr4:18726770 Bpe07g00865 Bpe-Chr7:14749891 9.34E-18 transposed
Bpe12g00676 Bpe-Chr12:12397304 Bpe07g00865 Bpe-Chr7:14749891 6.54E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00865 - - oeu:111367116 312.768