Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00881 ATGCTACTGGAATATAATTTTATGGCCCCAACTGTTCCTATAGAGTTCACTGGCCAGAAGGAATCAAGAAAGTACTCTCTTTCACAGACAATGGGTAAATCTAGGAAATATTCCAAAGGGCTTTCATCCGGTTTTGTCTCAGATTCCCGTCATGTTGTAGAGACTATTGATGAATCAGATGGTTTTGGAAGTTCAGCGCAGGTTGAAGATGAGGCAATTGCTATAGAAAATTCACGTGCTCCTAAAAGGAAGTGTATTAGTTTGAATGGTTGTGATAACTTTGGTGTTGGTTTACAAGTGTTGTCTGTGTCAAAAATGACACCTTCTGAAAGGAAGGATTTGGAATTGAAGTTGAAGATGGAACTTGAGCAGGTTCGGGCAATCCAAAAGAAAATTTCTAGTGTTGGCGCTTTGTCCACATCAAGTTATACTAAGAGCTATAGTGTTGGACAGAGAGGAGCCTCTTTTGAGAATTTCAATAGGCCGTCCCAAGTCTCAGCTTCTACAGCTTCTAAGGGTAAGAAACGTCCAAATGGTACTCAAGCCAAAAAAAACAATTTTGGACCAGCCAAACCTGCAGCTGCTGTGAGTACGTCAAATGCTGCATTAGTCAAGCAGTGTGAAACACTATTGAATCGTTTAATGTCTCATCAGTATGCTTGGATTTTCAACTCCCCAGTCGACGCTGTGAAGTTGAACATTCCTGATTATTTCACTGTCATAAAGCATCCAATGGACTTGGGAACAGTGAAGAGCAACATGGTTATGGACAAATATAGAGATTTAATGGATTTCGCTGCAGATGTGAGGCTTACTTTTTCAAATGCTATGACTTACAATCCTCCAGAAAATGATGTTCATTTCATGGCAAGTTCACTTAGTAAATATTTTGAAATGAGATGGAAAGGTATAGAGAAGAAGCTTCCATTACCCATTAACGTGCCTTCAAGAGTTCAAATGGACACTGAAGCTTCTTTAAGTGTACCACTTTCAACTAATGAGCAAATTACTACAGATGACTTTTATGGTCAATCGGATGTTAATAGGAAACCAATGACTGATGAAGAAAAGCACAAGTTTAGTTTGGAGTTGGATTCTTTATCTACAGACTTGCCTCAAAGCATAATTACATTCCTGAAGGAGCACAGCTCTAGTTCAGGTCAAAACAGCGAGGATGAGATTGAAATTGACATTTATGCACTCAGTGATGATACGTTGTTCACTCTGAGGAAGCTTTTGGATGATTGTTTATTAAAGCCAAAAACCCAAGTGAAGGCAGAATCTTTTGATTTGGAGCGTCAGAATGAATCAGGGATTCACAATTCATCCATAGATGCCTGTAAAGGAAATGACCCAATTGACGAGGATGTGGATATTGTTGGTGGAAATGATCAACCAGTGTCTACCTATCTTCCATTGGAAATAGATAATGATGTTGTTTGTCGTCGTACCAAAGGCGACAGCTCATGCACTTCAAGTGGGGACTCAGGGTCTTCATCAAGTGATTCTGGCTCAGGCGGTTCATCTGAAGATGCCAATGCCGTAGGTCCTAGCAGCATCACAAAGGAAATCATTGATGACAAAACTATTTCAGATAATCAAAGAGTTCAGTTGGGTGATTCAGAAAATCCCACTTATTCAGAAAATGAGGTTGGTATAACTGAGCCCAATTTTCAGCCAGAATCAGTTTCTTTAAAGACAGATACTCAACAAGAGGTGGATAGCGCTCCATCTGAGAGGCAAGTCTCGCCTGAAAAACTATACCGTGCAGCACTATTGAGGAATCGTTTTGCTGATACCATACTTAAGGCTCGAGAAAAAGCATTTGAAAAGGGTGACAAACTTGACCCAGAAAAACTTCGAATGGAGAGAGACGAACTTGAAAGGCGGCAAAAAGAAGAAAAGGCTAGACTCCAAGCGGAAGCCAAGGCTGCAGAAGAGGCAAGAAGAAAAGCTGCTCGAGAAGCTGCGGCTGAAGCTAAAAGGAAGAGGGAGCTAGAGAGAGAAGCTGCACGTCAGGCATTGTTAAAGATGGAAAAGACTGTTGAAATCAATGGGAATAGTCTGTTTATGGAAGATCTGGAACTCCTCAGGGTTTCCCACGAGGAAGATTTACCAACTTCTGGAGAGCAGACAAGCCCAGATCATTTATCGGGTGGGTTGGGTAGTTTTAAGCTACAAGGGAGCAGTAACCCCTTGGAGCAGCTTGGCTTGTACATGAAAAGGGAGGATGGCGATTTTGACGATGATGAAGTGGAAGAACCCCAGGGTTCTGAACCGGTAAATGATGTCGAGGAAGGGGAAATCGACTAG 2313 41.55 MLLEYNFMAPTVPIEFTGQKESRKYSLSQTMGKSRKYSKGLSSGFVSDSRHVVETIDESDGFGSSAQVEDEAIAIENSRAPKRKCISLNGCDNFGVGLQVLSVSKMTPSERKDLELKLKMELEQVRAIQKKISSVGALSTSSYTKSYSVGQRGASFENFNRPSQVSASTASKGKKRPNGTQAKKNNFGPAKPAAAVSTSNAALVKQCETLLNRLMSHQYAWIFNSPVDAVKLNIPDYFTVIKHPMDLGTVKSNMVMDKYRDLMDFAADVRLTFSNAMTYNPPENDVHFMASSLSKYFEMRWKGIEKKLPLPINVPSRVQMDTEASLSVPLSTNEQITTDDFYGQSDVNRKPMTDEEKHKFSLELDSLSTDLPQSIITFLKEHSSSSGQNSEDEIEIDIYALSDDTLFTLRKLLDDCLLKPKTQVKAESFDLERQNESGIHNSSIDACKGNDPIDEDVDIVGGNDQPVSTYLPLEIDNDVVCRRTKGDSSCTSSGDSGSSSSDSGSGGSSEDANAVGPSSITKEIIDDKTISDNQRVQLGDSENPTYSENEVGITEPNFQPESVSLKTDTQQEVDSAPSERQVSPEKLYRAALLRNRFADTILKAREKAFEKGDKLDPEKLRMERDELERRQKEEKARLQAEAKAAEEARRKAAREAAAEAKRKRELEREAARQALLKMEKTVEINGNSLFMEDLELLRVSHEEDLPTSGEQTSPDHLSGGLGSFKLQGSSNPLEQLGLYMKREDGDFDDDEVEEPQGSEPVNDVEEGEID 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14913513 14918046 - Bpe021724.1 Bpe07g00881 106650

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00881 770 MobiDBLite consensus disorder prediction 158 185 - -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 564 583 - -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 564 578 - -
Bpe07g00881 770 PRINTS Bromodomain signature 268 287 IPR001487 GO:0005515
Bpe07g00881 770 PRINTS Bromodomain signature 234 250 IPR001487 GO:0005515
Bpe07g00881 770 PRINTS Bromodomain signature 218 231 IPR001487 GO:0005515
Bpe07g00881 770 PRINTS Bromodomain signature 250 268 IPR001487 GO:0005515
Bpe07g00881 770 Pfam Bromodomain 207 290 IPR001487 GO:0005515
Bpe07g00881 770 Coils Coil 111 131 - -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 484 559 - -
Bpe07g00881 770 Gene3D - 345 423 IPR038336 -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 710 734 - -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 531 559 - -
Bpe07g00881 770 SMART bromo_6 196 306 IPR001487 GO:0005515
Bpe07g00881 770 MobiDBLite consensus disorder prediction 620 667 - -
Bpe07g00881 770 PANTHER TRANSCRIPTION FACTOR GTE10 32 756 - -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 701 770 - -
Bpe07g00881 770 ProSiteProfiles Bromodomain profile. 215 287 IPR001487 GO:0005515
Bpe07g00881 770 MobiDBLite consensus disorder prediction 484 516 - -
Bpe07g00881 770 PANTHER TRANSCRIPTION FACTOR GTE8 32 756 - -
Bpe07g00881 770 Coils Coil 624 670 - -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 440 471 - -
Bpe07g00881 770 CDD Bromo_plant1 205 301 IPR037377 -
Bpe07g00881 770 SUPERFAMILY Bromodomain 198 310 IPR036427 GO:0005515
Bpe07g00881 770 Gene3D - 183 310 IPR036427 GO:0005515
Bpe07g00881 770 Pfam Bromodomain extra-terminal - transcription regulation 351 414 IPR027353 -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 746 770 - -
Bpe07g00881 770 ProSiteProfiles NET domain profile. 342 424 IPR027353 -
Bpe07g00881 770 MobiDBLite consensus disorder prediction 158 192 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00881 - - - csv:101217420 738.413
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00881 Bpe-Chr7:14913513 Bpe14g00628 Bpe-Chr14:5166687 3.42E-39 dispersed
Bpe01g00790 Bpe-Chr1:8321156 Bpe07g00881 Bpe-Chr7:14913513 1.96E-21 transposed
Bpe08g00614 Bpe-Chr8:4837509 Bpe07g00881 Bpe-Chr7:14913513 3.82E-32 transposed
Bpe12g00488 Bpe-Chr12:10683433 Bpe07g00881 Bpe-Chr7:14913513 6.33E-73 transposed
Bpe11g01508 Bpe-Chr11:11189944 Bpe07g00881 Bpe-Chr7:14913513 3.21E-169 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g154 . . Bda06g00738 . . . . Bma12g01074 . . . Cma11g00049 Car10g00063 Car11g00042 . . Cpe04g01603 Bhi02g00543 . . . Hepe09g0065 . . Cla06g01728 Cam06g1918 Cec06g1968 Cco06g1972 Clacu06g1874 Cmu06g1816 Cre06g2631 . . Cone13ag0209 Cone19ag0196 . . . . . . . . Bpe07g00881 . . . . Cmo10g00071 Cmo11g00050 . . . . . . . . . . . . . . . . . . . . Lsi06g01625 Csa01g00073 Chy02g02647 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003560 2 5 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 5 1 1 47
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00881 Bpe_Chr07 FPKM 0.0 0.0 0.402608 0.0 25.590578 24.468502 26.251776 0.0 0.0 0.0