Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00898 ATGGCGTCGGAAACCGCAGACGATAAAAAATCCGAGGAAGAAGCTCATGTCGAGGAGGTAAAGGAGCTCAAACTGCCAGAAAAGGAGGAAACCGAAGAGCAAACGAAAAGTGAAGAATTAGAGCATGGTAAATCTGAAATTTCAGAGAAAGAGCGAAAGGAAGAAGTCGAAGGTGGAGGGAAAGACGAAGGGGAGGGGGAAGCGGAAAGCGAAGTTGATAGCGAAGGTAAAGAGGAAAGTAAAGGTGACCTGGAGGAGAAAAATGCTGAAGAAGGCGAAGTGAAAAAGGAGGAAGAAGCAAAGGAACTCCCGAAAGAGAAGGACAAAAAGGAGAAGAGGAGAGGGAGAAGGAAATCGGGAGAGAAAAAAATGGACAGTACTCCTAGTTCGAGGGAGCCGGTTACCCCAATGAGTGACAGGCCGACGAGGGAGAGAAAGACCGTTGAACGGTATTCGGTAACGTCCCCAGCTAAGTCTGGAAGATCATCAGCAGGCAAAGGATTGTCAATTGAGAAGGGTCGTGGTACACCGCTTAAAGAAATTCCAAATGTGGCTTTCAAACTTTCAAAGAGGAAAGCTGATGACAATCTTCAAGTGCTTCACACTATACTTTTCGGCAAGAAGGCAAAGGTACATAATTTGAAAAGAAACATAAACCAGTTTTCAGGTTATGTTTGGGTCGAGGATGAGAAAGAAAAACAGAGATTCAGAATAAAGGAGAAACTTGACAAGTGTGTTAAAGAAAAATTGGTGGATTTTTGCGATGTGCTAAATATTCAAATCAACAAGGCAGGAATAAAGAAGGAAGAACTCTCAGCCAAATTATTGGAGTTTTTGGAATCACCCCATGCAACTACTGATGTTATACTTGCTGATAAGGAGCAGAAAGCTCAAAAGCGCAAAAGAAAAGTCGCACCAAATAAAGCTGTTGACTCTGCTGAAGCATCCATAGAAACTTCTGGAAAGAAACAAAAATCCCAATCTGGGAAATCAAAAAAGAATGTGCCCAAAGTTGAGGAAGATGACGAGGTTGATGACAAAGTAGAACCTTCAGACGAGAAATCCAGTTCTCATGGAGATGACGGCAATGACACTGAGCAAAATGAAGATAGTGATAATGAGGAAAGTCAATCGGAAGATGAAAAATCACCAAAGCAAATGCTCAGTTCAAAAGTAGCTTCACGGTCTACGCCTAAGGAGAAAGCTACATCAACCAAAAAACAGGCATCTGCAAAAATTGATAAAGATGCTACCATGTCTAAGGAAAAAACATCTCTTTCAACAAAAAGGAAAGGAGATCCTGATAAAGCATCTGGTTTAATATCTAAATCAAAAGCATCCAAAAAACAGAAGATAGAGGAACCCAAGCCTAAAAAAGAGAAGCCCAAAAGCAAGCAACACTCGACGAAATTACCCGCATGTTTCTTGGTACTTGAAACAGGAAAAGGTAAATCTTCCAAGAAGTCCAAAGTGGAGCCTAGCAAAGAGCAGATGCACGCAGTTGTGGTTAATATTTTGAAGGACGTGGATTTTAATACTACCTTATGGATAAACTTTTCCTATGTAATTGTTTCAGGCTCTCACTTTGGGGTCGATTTGATGCATAGAAAGGCAGAGGTGAAGGATATAATCACAGAAGTCATCAGCAACATGAGTGATGAGGAAGAAGGAGACGAAGCAGAGGAAAATGCAGGAGGTGATGATTCAGACAAAGATGATGACAATGACGACGATGCTTAG 1740 41.49 MASETADDKKSEEEAHVEEVKELKLPEKEETEEQTKSEELEHGKSEISEKERKEEVEGGGKDEGEGEAESEVDSEGKEESKGDLEEKNAEEGEVKKEEEAKELPKEKDKKEKRRGRRKSGEKKMDSTPSSREPVTPMSDRPTRERKTVERYSVTSPAKSGRSSAGKGLSIEKGRGTPLKEIPNVAFKLSKRKADDNLQVLHTILFGKKAKVHNLKRNINQFSGYVWVEDEKEKQRFRIKEKLDKCVKEKLVDFCDVLNIQINKAGIKKEELSAKLLEFLESPHATTDVILADKEQKAQKRKRKVAPNKAVDSAEASIETSGKKQKSQSGKSKKNVPKVEEDDEVDDKVEPSDEKSSSHGDDGNDTEQNEDSDNEESQSEDEKSPKQMLSSKVASRSTPKEKATSTKKQASAKIDKDATMSKEKTSLSTKRKGDPDKASGLISKSKASKKQKIEEPKPKKEKPKSKQHSTKLPACFLVLETGKGKSSKKSKVEPSKEQMHAVVVNILKDVDFNTTLWINFSYVIVSGSHFGVDLMHRKAEVKDIITEVISNMSDEEEGDEAEENAGGDDSDKDDDNDDDA 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15006042 15011167 + Bpe021739.1 Bpe07g00898 106667

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00898 579 MobiDBLite consensus disorder prediction 294 308 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 137 151 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 294 493 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 1 175 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 1 65 - -
Bpe07g00898 579 PANTHER OS01G0924900 PROTEIN 70 573 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 74 109 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 446 461 - -
Bpe07g00898 579 SUPERFAMILY DEK C-terminal domain 487 549 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 400 438 - -
Bpe07g00898 579 Gene3D - 485 550 - -
Bpe07g00898 579 MobiDBLite consensus disorder prediction 349 364 - -
Bpe07g00898 579 PANTHER DEK PROTEIN 70 573 IPR044198 GO:0003677|GO:0006325
Bpe07g00898 579 MobiDBLite consensus disorder prediction 549 579 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00898 K17046 DEK; protein DEK - jre:109014116 421.394
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe07g00898 Bpe12g00471 CCT
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g70 . . Bda06g00718 Bda15g00682 Bpe12g00471 . . Bma12g01088 . . Cma10g00046 Cma11g00021 Car10g00035 Car11g00020 Sed12g2525 . Cpe04g01627 Bhi02g00660 Tan09g2398 Cmetu02g1444 . Hepe09g0033 . . Cla06g01759 Cam06g1951 Cec06g2000 Cco06g2006 Clacu06g1908 Cmu06g1848 Cre06g2662 . . Cone13ag0236 Cone19ag0222 . . . . . Blo15g00199 . . Bpe07g00898 . . Bma08g00267 . Cmo10g00041 Cmo11g00021 . . . . . Cpe18g00919 . . . . . . . . . . . . . . Lsi06g01657 Csa01g00038 Chy02g02681 Cme02g02085
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009134 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00898 Bpe_Chr07 FPKM 111.469543 114.267784 171.825104 158.852493 173.990341 200.815262 155.336884 311.016724 307.771759 303.825348