Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00911 ATGGCGAACACCAGCCAACTGCCCTGCGACGGAGATGGCACTTGCATGGTCTGCAAGGCGAAGCCTCTGGAGGAAGAGAAACTCATTTGCAAAACTTGCGCCACACCGTGGCATGTTACCTGTCTCTCCACCCCTCCTGAAACCCTAGCTTCGACTCTCCAATGGGATTGCCCCGACTGTATTCCGCAGTCTGGTGACTGCGCAGCCAGCGATAATGTTCCCGTAGACGATTGCTCCAGCGGCCTGATCGCCGCTATCCGAGCGATTGAGGGTGATGCTTCGCTGACTGATAGAGAGAAGGCGAAGAGGCGTCAGGAGCTTTTGAGTGGGAAGAATCGATCTGAGAATGGGGTAGAAAATTTGAGCAAGGTTAAGCGGAAGAGAAGCGACGATGTTTTGGGAGTTCTTGACGAGACTCTGAACTGTTCATTTTGTATGCAGTTGCCTGAAAGGCCTGTCACGACTCCTTGTGGACACAATTTCTGCCTAAAATGCTTCCAAAAATGGATTGGACAAGGAAAAAAAACCTGTGCAAAATGTCGCTGCTTGATTCCTTCCAAAATGGCGAGTCAGCCTCGTATCAATTCTGCTCTTGTAGTTGCAATTCGTATGGCCAAGATGTCAAAGTCAAATGTGCCTGGTGACTCTCAAAAAGTTAATCATTTTGTACACAATATGCATAGGCCAGATAAGGCATACACTACAGAGCGGGCACAGAGGAGCGGAAAGGCCAATGCAGCGAGTGGGAAAATATTTGTTACAATCCCATCTGATTATTTTGGACCTATCCCGGCTGAAAATGACCCTGGGAGAAATCAGGGTGTGCTAGTGGGTGAAACATGGGAGGATAGGTTGGAGTGTCGACAATGGGGAGCTCACTTTCCTCACGTGGCAGGCATCGCAGGTCAGTCAGACTATGGTGCACAATCAGTAGTTCTTTCTGGAGGTTACCAAGATGACGAGGATCATGGAGAGTGGTTTCTCTACACTGGAAGTGGTGGTAGAGACCTTAGTGGCAATAAACGGACAAGTAAGGACCAGTCATTTGACCAGAAATTCGAGAAAATGAACAAAGCACTCAAAGTTAGTTGCATGATGGGTTATCCTGTTAGGGTAGTTCGGTCACACAAAGAGAAACGCTCTTCATATGCCCCAGAGAAAGGTTTGCGGTATGATGGAGTATATAGGATTGAGAAATGTTGGAGAAAAGTAGGAGTCCAGGGCTTTAAGGTGTGTAGGTACTTATTTGTCAGATGTGACAATGATCCAGCTCCTTGGACCAGTGATGAACATGGAGATCGGCCTAGACCCTTTCCTGGCGTTGCAGAATTGAAAAAAGCAATGGACATCACAGAGAGGAAAGGAAGCCCATCATGGGATTTCAATGAGGAAGATAATTGCTGGATGTGGAAGAAACCTCCACCAGCAAGCAAGAAATCAATTGAAATAGAAGGTTCTGATTCAAGAAAGAGATCTATAAGAGCCATAAGAAAAGCCCAGAAAATGAATGTTAGAGACAGATTGTTGAAAGAATTTAGCTGCTCTATATGCAGGCAGGTAATGATTCAGCCAGTCACAACTCCATGTGCACATAATTTTTGCAAGACCTGCTTGGAAGGCCGGTTTGCTGACAAGACATTCATGAGGGACAGAAGCAGAGGTGGAAGAACTCTTCGATGCCAAAAGAATATCATGATTTGTCCTTCTTGTCCTATGGACATCTCTGATTTTCTTCAGAATCCTCAGGTAAATAGAGAGTTACTTGACGTAATTGAAACACTAAAAAGTCAGAATGAAGAGAATGGTGAGTCTGCAGACGACTCACCTGAGGAGGAAATTACTGAAAAATCAGAGGAACCAAGCAAGTACAATGAAACCAAGGTAGCTTTTCCCAGCCAAGTGAGTCCAAACAGAGGTCAAAAGCGAAAGAAAATCGACAAAAGGGAAGATGCTAATGGAGATAATAAAGCTATAGACTCAGAAGTGGAGAAATCAGGATTATCTGAAGAATGTGATGAATAA 2022 45.2 MANTSQLPCDGDGTCMVCKAKPLEEEKLICKTCATPWHVTCLSTPPETLASTLQWDCPDCIPQSGDCAASDNVPVDDCSSGLIAAIRAIEGDASLTDREKAKRRQELLSGKNRSENGVENLSKVKRKRSDDVLGVLDETLNCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKKTCAKCRCLIPSKMASQPRINSALVVAIRMAKMSKSNVPGDSQKVNHFVHNMHRPDKAYTTERAQRSGKANAASGKIFVTIPSDYFGPIPAENDPGRNQGVLVGETWEDRLECRQWGAHFPHVAGIAGQSDYGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKMNKALKVSCMMGYPVRVVRSHKEKRSSYAPEKGLRYDGVYRIEKCWRKVGVQGFKVCRYLFVRCDNDPAPWTSDEHGDRPRPFPGVAELKKAMDITERKGSPSWDFNEEDNCWMWKKPPPASKKSIEIEGSDSRKRSIRAIRKAQKMNVRDRLLKEFSCSICRQVMIQPVTTPCAHNFCKTCLEGRFADKTFMRDRSRGGRTLRCQKNIMICPSCPMDISDFLQNPQVNRELLDVIETLKSQNEENGESADDSPEEEITEKSEEPSKYNETKVAFPSQVSPNRGQKRKKIDKREDANGDNKAIDSEVEKSGLSEECDE 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15082699 15088459 - Bpe021752.1 Bpe07g00911 106680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00911 673 Pfam SAD/SRA domain 270 421 IPR003105 -
Bpe07g00911 673 CDD RING-HC 142 180 - -
Bpe07g00911 673 SUPERFAMILY RING/U-box 133 188 - -
Bpe07g00911 673 ProSiteProfiles Zinc finger PHD-type profile. 12 63 IPR019787 -
Bpe07g00911 673 SUPERFAMILY FYVE/PHD zinc finger 8 63 IPR011011 -
Bpe07g00911 673 SMART ring_2 142 180 IPR001841 -
Bpe07g00911 673 SMART ring_2 15 60 IPR001841 -
Bpe07g00911 673 SMART ring_2 514 570 IPR001841 -
Bpe07g00911 673 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 13 61 IPR013083 -
Bpe07g00911 673 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 210 IPR013083 -
Bpe07g00911 673 SMART G9a_1 265 422 IPR003105 -
Bpe07g00911 673 MobiDBLite consensus disorder prediction 595 673 - -
Bpe07g00911 673 ProSiteProfiles Zinc finger RING-type profile. 514 570 IPR001841 -
Bpe07g00911 673 MobiDBLite consensus disorder prediction 639 665 - -
Bpe07g00911 673 ProSiteProfiles YDG domain profile. 270 418 IPR003105 -
Bpe07g00911 673 ProSitePatterns Zinc finger PHD-type signature. 15 60 IPR019786 -
Bpe07g00911 673 SMART PHD_3 14 61 IPR001965 -
Bpe07g00911 673 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 660 IPR045134 -
Bpe07g00911 673 SUPERFAMILY RING/U-box 507 598 - -
Bpe07g00911 673 ProSitePatterns Zinc finger RING-type signature. 529 538 IPR017907 -
Bpe07g00911 673 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 499 624 IPR013083 -
Bpe07g00911 673 SUPERFAMILY PUA domain-like 244 436 IPR015947 -
Bpe07g00911 673 Pfam RING-type zinc-finger 514 560 IPR027370 -
Bpe07g00911 673 Gene3D - 241 436 IPR036987 -
Bpe07g00911 673 ProSiteProfiles Zinc finger RING-type profile. 142 181 IPR001841 -
Bpe07g00911 673 Pfam Zinc finger, C3HC4 type (RING finger) 142 180 IPR018957 GO:0046872
Bpe07g00911 673 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 1 660 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00911 Bpe12g00455 CCT
Bpe07g00911 Bpe12g00455 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00911 Bpe-Chr7:15082699 Bpe14g01288 Bpe-Chr14:9798260 1.11E-20 dispersed
Bpe14g00228 Bpe-Chr14:2459645 Bpe07g00911 Bpe-Chr7:15082699 3.39E-07 transposed
Bpe12g00455 Bpe-Chr12:10277793 Bpe07g00911 Bpe-Chr7:15082699 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00911 K10638 - csv:101220457 971.459