Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00933 ATGGCTTCTTCTCCAAATGTCAGAATACGAGTTGTAGCGAAATTGAAGGGATTGTCAGCTCGGGAATTGGAACTTTCAGGTGCGGATCCAGCAAAACCTTGGATTTTTGTTGATACGAAAGGTGAAGATTCTTCAGGGACCGTAAAAATCACGTTTGGAGAATCTTCTGGGTCGAAAGAGTCGTACGGATTGGATTATTGCTATCACCAAAACGAAGAGAATGCTAACATTTTTACCAGAGAAATAAAATCTCTAATTTCGGGGGTATTTGATGGCCATAATTCTACTGTTATAGCCTATGGAGCTAAAGGCAGTGGAAAGACCAGCCTGATTCAGGGTTTTAGGGAAAAACCTGGTTTGGCAGCATTATCTATGGCTGATTTTCTCACGATGGCAGAAGAAAAAGGAAAAACAGTTTCTATATCTTTTTATGAGGTTTATTTGGATCATGTATATGATCTACTGGATGCAAAGCGGCCACCGGTTTTGTTGTTGGACGATGGACGAGGCAAAATTCAACTTAAGGGACTTTCAAGAGTTCGAGTTAATTCTATTTCGGAATTTTATAAATTATATTTTTTGGGATCTAGTGCACATAAACCAACGCAAAAGATGGCAGCTGAGCTTCCTCTTCGAAGCCACAAGGGCTTGATTATATATTTATCACATGCTAATGAAATGTTTGATACCCGTGACGTCAAGATGAATTTCGTTGACTTGGCCGGTTACGAGGATGCTAGAAGGAAAAGTAGCAATGGTCTGAATTTCATGGAGATTAGTAAAGTTAACAAGTCTATATATGCCTTAATGAATGTTTTATATGCTTTGAACATTAATGATAGCCATGTTCCTTACCGAGAAAGCAAAGTTATGCGCTTGCTACGAGATTCCTTTGAAGCAAATAGCAAAATTGTAGTAGTTGCATGCTTGAACCCATATTTTTGTCAAGATTCTATTTACATGGTAAGTTTGGGATCTCGTTTATGTCAAAGAAACAACATAGATATTTCAGGCTTCGCTCGGAAAGTCAAAGTTTTCACCAGAAATTTAGGCTTATCACAAATACCTGAGAGTGTCACTATTCATGCAAAGAAACAAAATATCTCCCGAGTAGTTCAATCTGAGAAGAAACCACAAGCCAATCCTAAGATGGCTACTCCTATGAGAAGAAGAAAATTATTTGTCAACGCACGTGATTCGCAAAAATCAAATAAGGCTGCAGAGAAATTTGCTTCCAACGAGATCAGTAGCATAGATGAATCATGCATTGTAGGAGAAGATAGCAATCTGGATAATTTGGCGGTAGAGGAGTTTTCTCTTACCATGAGCAGTAGTAAAGAAATATCAGATGATTATAAAGATGAGGGATCCACAAGTTTATTGACCAATATCAGTGACCATATCGAAGAAGTTAGTTCAAAAATCGAAAGAGCAAATGAAGAATCGTCTCCTAAAGATGATGTGAAGCTAGCAAAGGAGAATGTTGGTTCACTAATCAATGAGACTAGATCTCCACCATTGAGTGCAAGATTACGAGATCTTACTAACGAGATGAGATCTTTATATTCTGCAAGACCATTATCCATGAACATTCCTCACAACGGCGAAACTCCATCCTCCGATTTACGCTCCATTAGTTTCGTGGAATATCAAACTCCAGTAAGGAAAGAGAACATTATTGGCAAGGATGGACATGATGCTACTCGATTTAACAGTCCGTGGGAAAGATTTAGCTCCTGTAGTAAAGGAGTACAGAATTTCCTTGTTGAAGACTATCTTAAATTTCTGAATACCGCAAACAAGGAAGAGCTTACAAAATTAAAGGGAATTGGGGATAAGAGAGCAACTGCAATTATTGAATTCCGTGATGCTTCTCCGGAGCCATTTAAGAGTCTTGATGATTTGAAAGAAATAGGACTCTCCGTGAAGCAGATAAAGGGACTGCTGAGGAAGGAAATAGGAGGGCTATTCAACTAA 1977 38.49 MASSPNVRIRVVAKLKGLSARELELSGADPAKPWIFVDTKGEDSSGTVKITFGESSGSKESYGLDYCYHQNEENANIFTREIKSLISGVFDGHNSTVIAYGAKGSGKTSLIQGFREKPGLAALSMADFLTMAEEKGKTVSISFYEVYLDHVYDLLDAKRPPVLLLDDGRGKIQLKGLSRVRVNSISEFYKLYFLGSSAHKPTQKMAAELPLRSHKGLIIYLSHANEMFDTRDVKMNFVDLAGYEDARRKSSNGLNFMEISKVNKSIYALMNVLYALNINDSHVPYRESKVMRLLRDSFEANSKIVVVACLNPYFCQDSIYMVSLGSRLCQRNNIDISGFARKVKVFTRNLGLSQIPESVTIHAKKQNISRVVQSEKKPQANPKMATPMRRRKLFVNARDSQKSNKAAEKFASNEISSIDESCIVGEDSNLDNLAVEEFSLTMSSSKEISDDYKDEGSTSLLTNISDHIEEVSSKIERANEESSPKDDVKLAKENVGSLINETRSPPLSARLRDLTNEMRSLYSARPLSMNIPHNGETPSSDLRSISFVEYQTPVRKENIIGKDGHDATRFNSPWERFSSCSKGVQNFLVEDYLKFLNTANKEELTKLKGIGDKRATAIIEFRDASPEPFKSLDDLKEIGLSVKQIKGLLRKEIGGLFN 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15234677 15239087 + Bpe021774.1 Bpe07g00933 106702

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00933 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 327 IPR027417 -
Bpe07g00933 658 PANTHER KINESIN-LIKE PROTEIN KIN-10C 9 643 - -
Bpe07g00933 658 SMART kinesin_4 6 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00933 658 Gene3D Kinesin motor domain 1 329 IPR036961 -
Bpe07g00933 658 PRINTS Kinesin heavy chain signature 234 252 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00933 658 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00933 658 PRINTS Kinesin heavy chain signature 92 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00933 658 SMART HhH1_4 602 621 IPR003583 GO:0003677|GO:0006281
Bpe07g00933 658 Gene3D - 585 656 - -
Bpe07g00933 658 Pfam Kinesin motor domain 51 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00933 658 Pfam Helix-hairpin-helix motif 596 638 - -
Bpe07g00933 658 Coils Coil 461 481 - -
Bpe07g00933 658 ProSiteProfiles Kinesin motor domain profile. 8 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe07g00933 658 PANTHER KINESIN-RELATED 9 643 IPR027640 GO:0003777|GO:0007018
Bpe07g00933 658 SUPERFAMILY RuvA domain 2-like 592 649 IPR010994 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00933 K10403 KIF22; kinesin family member 22 - zju:107414505 564.303
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01328 Bpe-Chr4:19856968 Bpe07g00933 Bpe-Chr7:15234677 8.92E-14 dispersed
Bpe07g00933 Bpe-Chr7:15234677 Bpe10g00031 Bpe-Chr10:450304 1.61E-34 dispersed
Bpe07g00933 Bpe-Chr7:15234677 Bpe03g01039 Bpe-Chr3:29722398 8.01E-68 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g714 . Blo15g00172 . . . Bpe07g00933 . . . . . Cma15g01088 . Car15g01000 . . . . . . . . . . Cla01g00444 Cam01g0467 Cec01g0456 Cco01g0478 Clacu01g0466 Cmu01g0444 Cre09g2068 Cone1ag1166 Cone5ag0876 . . . Csa05g00279 Chy09g01230 . . . Bda06g00688 . . . . Bma12g01117 . . Cmo15g01148 . . . . . Cpe13g00262 Bhi12g00497 . . . . . Lcy12g0037 . . . . . . . . . . Cme09g01562
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009133 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 3 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00933 Bpe_Chr07 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0