Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00937 AATATCATAGACTGCGAAAAGTTGGAGCCAGGAATATGTGCATTTGCAGTGTCGTCGTCAAGCAAGCGATGTGTGTTGGAAAAGCAAGTGAAGAGGAGCGGGGAGGAAGCATATACATGTCGAACATCAGAGATCGAAGCAGATGGATTAAGTAATTATGTCGAAACCGAGCAATGTGTTCAAGCTTGTGGAATCGACCGGAAAACTCTTGGGATCTCATCGGATTCCCTCTTGGACACTTCCTTTACACAAAGGCTTTGTTCTTCTCCTTGCTATAAGAATTGCCCTAATATTGTTGACCTTTACTTTGATCTTGCTGCTGGTGAAGGAGTGTTTCTTCCTAAACTCTGCGAAGTACAAGAAGGTAGAGAAGGTCGTGGAAGAGAAATGGGTGAGATCAGAAGCTCTGGTTTTGCAGTCAACCCCAACAATGGCGATTTAGTGGTTGCACCAGCTGCTTCTCCAACTCAATTTCCTGTTTAA 483 44.1 NIIDCEKLEPGICAFAVSSSSKRCVLEKQVKRSGEEAYTCRTSEIEADGLSNYVETEQCVQACGIDRKTLGISSDSLLDTSFTQRLCSSPCYKNCPNIVDLYFDLAAGEGVFLPKLCEVQEGREGRGREMGEIRSSGFAVNPNNGDLVVAPAASPTQFPV 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15260357 15261430 + Bpe021779.1 Bpe07g00937 106706

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00937 160 PANTHER PAR1 PROTEIN 3 144 - -
Bpe07g00937 160 Pfam PAR1 protein 3 155 IPR009489 -
Bpe07g00937 160 PANTHER PAR1 PROTEIN 3 144 IPR009489 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00937 - - - egr:104424422 210.305
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00762 Bpe-Chr4:4877773 Bpe07g00937 Bpe-Chr7:15260357 2.60E-41 transposed
Bpe03g00284 Bpe-Chr3:3894145 Bpe07g00937 Bpe-Chr7:15260357 4.31E-58 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g691 . Blo15g00168 . . . Bpe07g00937 . . Cmo16g00131 . . . . . . . Cpe14g00106 . . . . . . . . . . . . . . . . . . Lsi05g01222 . . . . . Bda06g00684 . . . . . . . . Cma16g00122 . Car16g00112 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003494 2 2 2 3 2 1 1 1 1 1 1 1 1 2 2 1 1 3 1 1 2 1 1 1 1 2 1 3 1 3 46
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00937 Bpe_Chr07 FPKM 61.269783 66.166946 44.022465 43.250683 49.100822 56.786823 47.326817 27.167213 27.777935 22.948231