Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00954 ATGGCTGCTCCTCACTCTAAAACCCCACTCACTGATCCGGTGGAGAACCCACCCCAACTGTCACCGCCACTCCCGCCGCCGCTTACTTTACAGTCACAAGCTCCGGAGGGTCCTGACCGGAGAATTCCTCCTCTTCCGGTTGTTTCTTCTGTTCCAGGTCAAACGATCTCGCCAGCGACCGGCAGGCACCCGATTTACAGGGGAATTCGAAGCCGAAGTGGGAAATGGGTGTCGGAAATCCGGGAGCCGCGGAAAACCACCCGCATTTGGCTCGGAACTTACCTGACCCCGGAAATGGCTGCGGCGGCGTATGACGTTGCTGCCATCGAGCTTAAAGGGCCGGACACGCCGTTGAATTTTCCTAACTCAATTCTCTCGTATCCGATTCCGGCGTCAGCTTCTGCAGCTGATATTCGTGCTGCGGCGGCGATGGCGGCGGCATCTAAGCTGCCGACGACAACAGAGAGCAGCGGGGAAAGCTCCCGACTCAACCTGCCGGTGGAAGAAGAGCCGCCTAGCACTGTGCACGAGTTTGTGGACGAGGAAGAGTTGTTGAATATGCCGAATGTGCTCGTAGACATGGCAAAAGGAATGCTGATAAGCCCTCCTCGGATGAAGTCGTCGTCTTCCGACGACTCACCAGACGATTCAACGGGCGGTGGACTATGGAATTACAGCTAA 681 56.68 MAAPHSKTPLTDPVENPPQLSPPLPPPLTLQSQAPEGPDRRIPPLPVVSSVPGQTISPATGRHPIYRGIRSRSGKWVSEIREPRKTTRIWLGTYLTPEMAAAAYDVAAIELKGPDTPLNFPNSILSYPIPASASAADIRAAAAMAAASKLPTTTESSGESSRLNLPVEEEPPSTVHEFVDEEELLNMPNVLVDMAKGMLISPPRMKSSSSDDSPDDSTGGGLWNYS 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15344622 15345302 + Bpe021798.1 Bpe07g00954 106723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00954 226 MobiDBLite consensus disorder prediction 149 163 - -
Bpe07g00954 226 CDD AP2 64 123 IPR001471 GO:0003700|GO:0006355
Bpe07g00954 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 55 225 - -
Bpe07g00954 226 MobiDBLite consensus disorder prediction 201 226 - -
Bpe07g00954 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 55 225 - -
Bpe07g00954 226 MobiDBLite consensus disorder prediction 1 63 - -
Bpe07g00954 226 Pfam AP2 domain 64 113 IPR001471 GO:0003700|GO:0006355
Bpe07g00954 226 SMART rav1_2 65 127 IPR001471 GO:0003700|GO:0006355
Bpe07g00954 226 MobiDBLite consensus disorder prediction 203 226 - -
Bpe07g00954 226 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Bpe07g00954 226 ProSiteProfiles AP2/ERF domain profile. 65 121 IPR001471 GO:0003700|GO:0006355
Bpe07g00954 226 MobiDBLite consensus disorder prediction 15 32 - -
Bpe07g00954 226 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Bpe07g00954 226 MobiDBLite consensus disorder prediction 149 175 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00954 Bpe12g00412 CCT
Bpe03g00126 Bpe07g00954 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00954 Bpe-Chr7:15344622 Bpe12g00413 Bpe-Chr12:9713435 7.59E-45 dispersed
Bpe07g00954 Bpe-Chr7:15344622 Bpe07g00955 Bpe-Chr7:15349260 1.82E-35 tandem
Bpe12g00412 Bpe-Chr12:9705559 Bpe07g00954 Bpe-Chr7:15344622 2.57E-36 wgd
Bpe03g00305 Bpe-Chr3:4389013 Bpe07g00954 Bpe-Chr7:15344622 3.77E-49 wgd
Bpe03g00126 Bpe-Chr3:1798623 Bpe07g00954 Bpe-Chr7:15344622 3.33E-36 wgd
Bpe07g00128 Bpe-Chr7:906679 Bpe07g00954 Bpe-Chr7:15344622 2.47E-39 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21682 PF00847 AP2 2.00E-09 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00954 - - zju:107405052 205.682