Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe07g00955 | TTCATGGAGGTTTTCTCAAACTATTTTGATTCTAATTATGGGTCTTCCGAAAGAAGTGATGGTAGCAGGACGGGAAATTTTTCCGACGAGGAGGTTTTTCTGGCGGCGAGCTATCCCAAGAAGAGGGCTGGACGGAAGAAGTTTAAGGAGACTAGGCATCCGATTTACCGGGGAGTGAGGAGGAGGAATTCCGGCAAGTGGGTTTGTGAAGTAAGAGAGCCGAATAAGCAGGCGAGGATTTGGCTGGGGACGTTTCCGACCGCTGAAATGGCGGCTCGCGCCCACGACGTGGCAGCCATTACCCTCCGAGGCCGAGGAGCTTGCCTGAATTTCGCTGACTCAGCGTGGCGACTTCCAGTGCCGGCGTCGGCAGATGCAAAGGATATTCAGAAAGCAGCGGCCGAAGCTGCAGAGGCTTTTCGTCCAACGGAGACCAACCCACTGCAGAGGGAGGTCAACCCTGATAAGTCGGAGATGGGAGCCGCATGGAGAATGCCGGAAAATGAGTTCTACATGGACGATGAGGATGTTTTCGGGATGCCTGAGTTGCTGGTGAACATGGCGGAGGGAATGCTACTGCCGCCGCCGCCGCCGCAAAGGGAAGAAAGCAGAGTTGATGACGTGGATTTTGACGCTGACGTGCCACTATGGAGTCATTCTATATAA | 666 | 53.9 | FMEVFSNYFDSNYGSSERSDGSRTGNFSDEEVFLAASYPKKRAGRKKFKETRHPIYRGVRRRNSGKWVCEVREPNKQARIWLGTFPTAEMAARAHDVAAITLRGRGACLNFADSAWRLPVPASADAKDIQKAAAEAAEAFRPTETNPLQREVNPDKSEMGAAWRMPENEFYMDDEDVFGMPELLVNMAEGMLLPPPPPQREESRVDDVDFDADVPLWSHSI | 221 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15349260 | 15349925 | + | Bpe021799.1 | Bpe07g00955 | 106724 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe07g00955 | 221 | PRINTS | Ethylene responsive element binding protein signature | 78 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe07g00955 | 221 | PRINTS | Ethylene responsive element binding protein signature | 56 | 67 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe07g00955 | 221 | PANTHER | AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR | 16 | 221 | - | - | |
Bpe07g00955 | 221 | Pfam | AP2 domain | 54 | 104 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe07g00955 | 221 | Gene3D | AP2/ERF domain | 55 | 113 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe07g00955 | 221 | SUPERFAMILY | DNA-binding domain | 55 | 114 | IPR016177 | GO:0003677 | |
Bpe07g00955 | 221 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 16 | 221 | IPR045277 | GO:0003700 | |
Bpe07g00955 | 221 | ProSiteProfiles | AP2/ERF domain profile. | 55 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe07g00955 | 221 | CDD | AP2 | 54 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe07g00955 | 221 | SMART | rav1_2 | 55 | 118 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g00955 | Bpe-Chr7:15349260 | Bpe12g00412 | Bpe-Chr12:9705559 | 2.97E-107 | dispersed | |
Bpe07g00954 | Bpe-Chr7:15344622 | Bpe07g00955 | Bpe-Chr7:15349260 | 1.82E-35 | tandem | |
Bpe05g00627 | Bpe-Chr5:20182305 | Bpe07g00955 | Bpe-Chr7:15349260 | 3.12E-61 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21683 | PF00847 | AP2 | 5.80E-15 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe07g00955 | - | K09286 | qsu:112027778 | 267.7 |