Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00955 TTCATGGAGGTTTTCTCAAACTATTTTGATTCTAATTATGGGTCTTCCGAAAGAAGTGATGGTAGCAGGACGGGAAATTTTTCCGACGAGGAGGTTTTTCTGGCGGCGAGCTATCCCAAGAAGAGGGCTGGACGGAAGAAGTTTAAGGAGACTAGGCATCCGATTTACCGGGGAGTGAGGAGGAGGAATTCCGGCAAGTGGGTTTGTGAAGTAAGAGAGCCGAATAAGCAGGCGAGGATTTGGCTGGGGACGTTTCCGACCGCTGAAATGGCGGCTCGCGCCCACGACGTGGCAGCCATTACCCTCCGAGGCCGAGGAGCTTGCCTGAATTTCGCTGACTCAGCGTGGCGACTTCCAGTGCCGGCGTCGGCAGATGCAAAGGATATTCAGAAAGCAGCGGCCGAAGCTGCAGAGGCTTTTCGTCCAACGGAGACCAACCCACTGCAGAGGGAGGTCAACCCTGATAAGTCGGAGATGGGAGCCGCATGGAGAATGCCGGAAAATGAGTTCTACATGGACGATGAGGATGTTTTCGGGATGCCTGAGTTGCTGGTGAACATGGCGGAGGGAATGCTACTGCCGCCGCCGCCGCCGCAAAGGGAAGAAAGCAGAGTTGATGACGTGGATTTTGACGCTGACGTGCCACTATGGAGTCATTCTATATAA 666 53.9 FMEVFSNYFDSNYGSSERSDGSRTGNFSDEEVFLAASYPKKRAGRKKFKETRHPIYRGVRRRNSGKWVCEVREPNKQARIWLGTFPTAEMAARAHDVAAITLRGRGACLNFADSAWRLPVPASADAKDIQKAAAEAAEAFRPTETNPLQREVNPDKSEMGAAWRMPENEFYMDDEDVFGMPELLVNMAEGMLLPPPPPQREESRVDDVDFDADVPLWSHSI 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15349260 15349925 + Bpe021799.1 Bpe07g00955 106724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00955 221 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Bpe07g00955 221 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Bpe07g00955 221 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 16 221 - -
Bpe07g00955 221 Pfam AP2 domain 54 104 IPR001471 GO:0003700|GO:0006355
Bpe07g00955 221 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
Bpe07g00955 221 SUPERFAMILY DNA-binding domain 55 114 IPR016177 GO:0003677
Bpe07g00955 221 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 16 221 IPR045277 GO:0003700
Bpe07g00955 221 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Bpe07g00955 221 CDD AP2 54 114 IPR001471 GO:0003700|GO:0006355
Bpe07g00955 221 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00955 Bpe-Chr7:15349260 Bpe12g00412 Bpe-Chr12:9705559 2.97E-107 dispersed
Bpe07g00954 Bpe-Chr7:15344622 Bpe07g00955 Bpe-Chr7:15349260 1.82E-35 tandem
Bpe05g00627 Bpe-Chr5:20182305 Bpe07g00955 Bpe-Chr7:15349260 3.12E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21683 PF00847 AP2 5.80E-15 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00955 - K09286 qsu:112027778 267.7