Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00968 ATGGAAGAGAAGGAGAATTTGGGTGCTGGTTTTGCTCTTAAGGGTGATGAAGCTCCAGATAGCTATCAGGTTGCTCCGAGATCCGAAAACCCGAACCCGATTGTCGTCCCTACGGTTGCTCCTGCTCAGCCAGTTGCAGATGCTGTATCGCCGGCGAGTGCGGCGGCGACGGCGACATCGACGGCGACGGCTGGGAAGAAAAAGAGGGGCAGACCGAGAAAGTACGATACGAACGGAAAGGTAATACTGGCGCTATCGCCTATGCCGATTTCAGCGTCCATTCCGCTCACCGGAGAATATTCTGCTTGGAAAAGAGGTAGAGGAAAGCCATCGGCGTCGGTCAAGAAGTCCCACAAGTTTGTTTTTGGAACTCCTGGAGAGAGAATTGCGTACTCGGTCGGGGCAAATTTCACTCCTCATATGATCACGGTTAATCCTGGCGAGGATGTTACTATGAAGATTATGTCCTTCTCTCAACAAGGCTCTCAAGCAATTTGTATACTCGCCGCAAATGGTACGATCTCGAGTGTCACTCTCCGGCAGCCTACGACTTCTGGGGGTACTTTAACTTATGAGGGTCGTTTTGAGATACTTTCGCTATCTGGATCATTTATGCTAACCGAGAATGGAGGAACAAAGAGCAGATCTGGCGGAATGAGCGTCTCATTGGCGGGCCCGGATGGTCGAGTGGTAGGCGGAGGTCTTGCTGGTCTGTTGGTTGCTGCTGGTTCTGTGCAGGTTGTGGTAGGAAGTTTCATGCTAGGTCACCAGCAAGAAAACAAGCCAAAACAGCATCGAATTGACTTTACGACAAATGCAATCTCCCCCCAAATAAATTCCATGAATGGTGACGAACTCAAAGGAATCTATAGCAGCGTAAAGCCGATTGTGACTCCAGCTTCCTACCTTGAAGACGACTCAGCTTCTCTGTTTAGAATCTCATCAATCGACAACAAATCGTCTTTGCCCGAAGGCGATCCAATCAAACTGTGA 993 49.65 MEEKENLGAGFALKGDEAPDSYQVAPRSENPNPIVVPTVAPAQPVADAVSPASAAATATSTATAGKKKRGRPRKYDTNGKVILALSPMPISASIPLTGEYSAWKRGRGKPSASVKKSHKFVFGTPGERIAYSVGANFTPHMITVNPGEDVTMKIMSFSQQGSQAICILAANGTISSVTLRQPTTSGGTLTYEGRFEILSLSGSFMLTENGGTKSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGSVQVVVGSFMLGHQQENKPKQHRIDFTTNAISPQINSMNGDELKGIYSSVKPIVTPASYLEDDSASLFRISSIDNKSSLPEGDPIKL 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15472111 15474945 + Bpe021812.1 Bpe07g00968 106737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00968 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 324 IPR039605 GO:0003680
Bpe07g00968 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 8 324 - -
Bpe07g00968 330 MobiDBLite consensus disorder prediction 1 74 - -
Bpe07g00968 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 252 IPR005175 -
Bpe07g00968 330 Gene3D - 139 269 - -
Bpe07g00968 330 ProSiteProfiles PPC domain profile profile. 134 273 IPR005175 -
Bpe07g00968 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 136 253 - -
Bpe07g00968 330 CDD DUF296 138 252 IPR005175 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00968 Bpe12g00400 CCT
Bpe07g00968 Bpe12g00400 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00748 Bpe-Chr2:5216624 Bpe07g00968 Bpe-Chr7:15472111 3.48E-68 dispersed
Bpe07g00968 Bpe-Chr7:15472111 Bpe11g00702 Bpe-Chr11:5414807 2.56E-93 dispersed
Bpe12g00400 Bpe-Chr12:9426340 Bpe07g00968 Bpe-Chr7:15472111 5.99E-175 wgd
Bpe05g00642 Bpe-Chr5:20235543 Bpe07g00968 Bpe-Chr7:15472111 2.18E-51 wgd
Bpe07g00145 Bpe-Chr7:1020199 Bpe07g00968 Bpe-Chr7:15472111 2.20E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00968 - - qsu:112026407 351.673