Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g00999 ATGGAACAGAAGCACATTTTGTTATCTGCTTTGGGCGTTGGGGTAGGAGTAGGGGTGGGGCTTGGATTGAGCTCTGCCCAAGCTGTAAGTAAATGGGTCGGAGGAAATAACTCGCCGGATGAGTTTTCGGGTGAGCAGATTGAGCAGGAGCTGATGAGGTTGGTGATTGATGGGAAAGCAACCAAAGTTGTATTTGATGAGTTTCCTTATTATCTAAGTGAGCGGACTCGAGTGTTATTGACAAGTGCTGCATATGTTCATTTAAAGCAGATCGACATTGCCAAGCACACGCGCAATCTTTCACCGGCAAGTAGACTTATTTTGCTCTCGGGACCTGCTGAACTTTACCAGCAAATGCTAGCCAAGGCTTTGGCACATTATTTTGAATCGAAGTTGCTTTTGTTAGACGTTTCCGACTTTTCTCTTAAGGTAACTGTCTACGATCTCTATAACTTTTGGCTTCGCAAGGCTAATTCTTATGCTTTTAATATTTGCCTTTCCCAGATGCAGAGCAAATTCGGTTGTGTGAGGAAAGAATCTTCCTTCAAGAGGTCCATCTCTGAGGTAACATTTGAAAAAATGTCAAATCTTTTTGGTGCCTTCTCAATCCTTCCTCCGAGTGGGATAGCTAAAGGAACGATACGCCGAATGAATGGTTCTATGGAAATAAAATCGAGAAACTGTGATGGGTCCGAAAATCCTCCAAAACTTCGTAGAAATGCCTCTGCTGCCTCTGACATTAGTAGCTGCTCTTTAAAATCTGCTTCCTCAGATCAAGTTTCGTTGAAGCGCACGAGCAGCTGGTTTTTTGATGAGAAACTGTTTCTACAATCGCTATACAAGGTAAAAGAAGCTATGTGCCATTTTAATGGCTGCCCAATACCTTTCGTTTTAATTGAACTTGTCTTCTTACAGGTGCTAGTATCGGTATCTGAAACTGGATCCATTATTTTGTACCTGAGAGATGTCGAAAAGCTTCTTCTCCATTCACAAAGATTTTACCATATGTTCAATAAGTTGTTGAACAAACTCTCTGGCTCGGTTTTAGTTCTCGGCTCTCGAATGGTGGACCCAGAAGATGATTTCAGAGAAATAGATGAACGGATCAGCGTTTTATTTCCATACAACATCGAAATCAAACCCCCGGAAGACGAAACTCATCTTGTCAACTGGAAGGCTCAGCTGGAAGAGGACATGAAGATGATCCAGTTTCAAGATAATAAAAATCATATTGCAGAAGTTCTTGCTGCAAATGATCTTGAATGTGATGATTTGGGTTCGATTTGCCATGCCGATACCATCGTGTTGAGCAATTACATCGAAGAGATCGTTGTTTCTGCAATATCTTATCATTTGATGCATAGCAAAGACCCGGAATATCGAAATGGAAAACTTCTAATATCTTCCAAGAGTTTGTCCCATGGATTGAGCATATTTCAGGAAGGAAAAAGTGATGGAAAAGATACTATGAAGTTAGAGACAAATGCTGACTCTTCAAAGGAAGGTGGAGATGAAGCTCTTAGAACAAAAACAGATTCAAAATCTGAGGCGGAAAAATCCGGTTCTGCAGTTAAGAAGGATGGAGAGAATGGAAATCCTCAAAAAGCACCTGAAGTTGCTCCAGACAATGAGTTTGAAAAACGTATCCGGTCAGAAGTTATTCCGGCGAGCGAGATCGGAGTGACATTTGATGACATCGGAGCGATGGACGAGATTAAAGAATCACTTCAAGAACTCGTAATGCTACCTCTCCAAAGGCCAAATCTCTTCAATGGAGGTCTTCTCAAGCCTTGCAGAGGCATTCTTCTATTCGGACCGCCTGGAACGGGAAAGACAATGCTGGCAAAGGCCATTGCCAACGAAGCTGGTGCTAGTTTCATCAACGTTTCTATGTCCACCATTACTTCGAAATGGTTCGGCGAAGACGAAAAGAATGTTAGAGCTCTCTTCACACTCGCTGCAAAGGTGTCTCCAACGATTATTTTTGTCGACGAGGTCGATAGTATGCTCGGGCAGAGGACTCGAGTAGGAGAGCATGAGGCCATGAGGAAAATAAAGAATGAATTTATGACTCATTGGGATGGGCTTTTGACAAAGCCGGGTGAGCGAATTCTCGTTCTTGCTGCCACTAACCGGCCGTTTGATCTCGACGAAGCGATCATCCGTCGTTTTGAGCGAAGCAGAATTATGGTTGGCCTCCCCACGATCGAAAGCCGAGAGATGATCTTGAAAACTCTTCTGGCGAAAGAAAAGGTAGAAAACCTTGACTATAAGGAGCTTGCTACAATGACGGAAGGATTCAGCGGAAGCGATCTGAAGATTACTTTTTTCTTAAACTTTCAACATAGAGAAGAAAGAATTTATCTATTATCTTTGGACAAAAACCAGAATTTATGCGTGACGGCTGCTTACCGACCCGTGAGGGAGCTGCTCCAACAGGAGAGAATGAAGGATAAGTTTTCGAATTTCTTCCAACTGCAGGAGAAGAAGAAAAAAGACGAAAACGGAAAAAATTCGGATGAGAAGAGCTCGGATACGTCAGAAATGAAAGAAGAAGATAAAGAAGAACAAGTAATTGTTTTGAGGTCTTTGAATATGGAAGATATGAAACAGGCAAAAAATCAGGTGGCCGCGAGTTTTGCTGCTGAAGGATCGATAATGGGCGAACTAAAGCAATGGAACGACTCATATGGAGAGGGTGGTTCAAGGAAAAAGCAACAGCTAACATACTTCCTCTAG 2739 42.5 MEQKHILLSALGVGVGVGVGLGLSSAQAVSKWVGGNNSPDEFSGEQIEQELMRLVIDGKATKVVFDEFPYYLSERTRVLLTSAAYVHLKQIDIAKHTRNLSPASRLILLSGPAELYQQMLAKALAHYFESKLLLLDVSDFSLKVTVYDLYNFWLRKANSYAFNICLSQMQSKFGCVRKESSFKRSISEVTFEKMSNLFGAFSILPPSGIAKGTIRRMNGSMEIKSRNCDGSENPPKLRRNASAASDISSCSLKSASSDQVSLKRTSSWFFDEKLFLQSLYKVKEAMCHFNGCPIPFVLIELVFLQVLVSVSETGSIILYLRDVEKLLLHSQRFYHMFNKLLNKLSGSVLVLGSRMVDPEDDFREIDERISVLFPYNIEIKPPEDETHLVNWKAQLEEDMKMIQFQDNKNHIAEVLAANDLECDDLGSICHADTIVLSNYIEEIVVSAISYHLMHSKDPEYRNGKLLISSKSLSHGLSIFQEGKSDGKDTMKLETNADSSKEGGDEALRTKTDSKSEAEKSGSAVKKDGENGNPQKAPEVAPDNEFEKRIRSEVIPASEIGVTFDDIGAMDEIKESLQELVMLPLQRPNLFNGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGERILVLAATNRPFDLDEAIIRRFERSRIMVGLPTIESREMILKTLLAKEKVENLDYKELATMTEGFSGSDLKITFFLNFQHREERIYLLSLDKNQNLCVTAAYRPVRELLQQERMKDKFSNFFQLQEKKKKDENGKNSDEKSSDTSEMKEEDKEEQVIVLRSLNMEDMKQAKNQVAASFAAEGSIMGELKQWNDSYGEGGSRKKQQLTYFL 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15672117 15677335 - Bpe021843.2 Bpe07g00999 106768

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g00999 912 Gene3D - 734 775 - -
Bpe07g00999 912 MobiDBLite consensus disorder prediction 828 856 - -
Bpe07g00999 912 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 304 773 - -
Bpe07g00999 912 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 145 - -
Bpe07g00999 912 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 168 283 - -
Bpe07g00999 912 CDD AAA 567 733 - -
Bpe07g00999 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 560 773 IPR027417 -
Bpe07g00999 912 Gene3D - 560 733 IPR027417 -
Bpe07g00999 912 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 283 - -
Bpe07g00999 912 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 304 773 - -
Bpe07g00999 912 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 145 - -
Bpe07g00999 912 SMART AAA_5 597 735 IPR003593 -
Bpe07g00999 912 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 796 912 - -
Bpe07g00999 912 MobiDBLite consensus disorder prediction 479 544 - -
Bpe07g00999 912 MobiDBLite consensus disorder prediction 484 525 - -
Bpe07g00999 912 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 796 912 - -
Bpe07g00999 912 Pfam ATPase family associated with various cellular activities (AAA) 601 727 IPR003959 GO:0005524|GO:0016887
Bpe07g00999 912 ProSitePatterns AAA-protein family signature. 704 723 IPR003960 GO:0005524|GO:0016887
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g00999 - - - jre:109010848 1284.63
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00884 Bpe-Chr7:14929705 Bpe07g00999 Bpe-Chr7:15672117 9.23E-144 dispersed
Bpe07g00999 Bpe-Chr7:15672117 Bpe10g00458 Bpe-Chr10:11912883 6.31E-17 dispersed
Bpe05g00666 Bpe-Chr5:20372967 Bpe07g00999 Bpe-Chr7:15672117 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g264 . . . . . Bpe07g00999 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda06g00769 . . . . Bma12g01184 . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi16g811 . . . . . Bpe07g00999 . Bma14g02021 . . . . . . . . . . . . . . . . . . . . . . . . . Cone14ag0044 . . . . . . . Bda06g00769 Bda15g00666 . . . Bma12g01184 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001190 2 3 2 2 2 2 2 2 2 2 2 2 3 2 2 3 2 5 4 2 3 2 2 2 2 2 2 5 3 4 75
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g00999 Bpe_Chr07 FPKM 3.366591 4.582155 8.031139 8.47038 7.380966 7.302964 9.023496 0.0 0.0 0.0