Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01010 ATGCTTTCTGAGAATACTAGAAAATCATTTCGACGGGTTCGGGAACACCGGGGAAGTTTCCTTCAGCTAGCTTCATGCGTGATTGCAGTTTCACTTGATCCTTTCTTCTTTTACATCCCCGTCATTAACGATCATGAAAAGTGCTTTGATTTTGACAAGAAGTTGCGGATAGCAGCTTTGGTTTTGCGATCGGTCACAGACATCATTTTCATGTTTCATATTGCTTTTCAGTTTCGTACTGGATATGTTGCGAGGCCCAATCTGTTCCACATAGCTGGAGTAAATGACGAAGTACCTAGCTCTTGGGAAATACCCAAGACCTATATGTTATCTTACTTCTTAATCGACATTCTATCACTTCTTCCCCTTCCTCAGGTAGTAATTTTATCTATTATTCCAGAGATGAAAGGCTCAAAATCTTTGATTGCGAGGAACATCCTTATAGCTATTGTTTTATTGCAATATGTTCCCAGAGTTGTTCGAATTTACCCATTATACAAGAAACTTACGTGGACGCCAAGGATTTTCAAGGGAACTCTTTGGACTAAAGCTGCTCTTAATCTCTTTCTCTATATGCTAGCAAGTCATGTACTTGGAGCATTGTGGTACTTCTTTTCCATTGAAAGAGAGATGACATGCTGGCTGGAAGCTTGTGAGGGTCATCCTGGTTGTGACCATAGTTCCTTCTTCTGTGATGATGTGATAAGAGCTACTGAATTCCTTCATGATATGTGTCCCATAGATACTCCAAATACAAATCTTTTTGACTTCGGTATATTCCTGGATGCCCTTCAGTCTGGTATTGTGGAGTCAGTCAATTTACCCCAAAAGCTTTTCCGTTGCCTCTGGTGGGGCCTCCAAAATTTGAGTTCTCTGGGTCAAAACCTCAAAACAAGTACCTATGTCTGGGAGAATATTTTTGCAGTTTTTATATCCACCTCTGGCTTGGTTCTATTTTTATATTTCATTGGAAATATGCAGACATATATGCAGTTGAAAACTGTAAAAAAAGAGGAGAAGAGAATGGAGATAAGGTCTAAGGCGGAAGCTGTTGACTTATGGATGTCCAATAATGGTCTACCTGACCGTTTTAAAAGGAGAATCAAGCATTGTGTAGAAAAGAAATGGCATGAAATCAGAACTGTGGATTCAGAAAATTTGATTCCAATTCTTCCCATGGATCTCCAGAAAGATATAAAGTGTTTTTTAGGCTCGAATCTTGTTCTGAGAGTTCCAGTGTTTGCATTGATGGATGATCAGCTGTTGGATGCCATGTGTGGTTGTCTGAAACCAGTGGTCTATTCCACAGAGAGCTACATCATTCGGAAAGGTGATCCAGTCGAGGAAATGTGCTTCATCTTCCGTGGCAAGGTGTTGTTATGGTTGACGAATACAAATGTTGGAAGAACTGAATTCTTTAGTTCCGTAAAACTACAGACTGGTGACTTCTGTGGAGAAGAACTATTGACATGGGCTTTCAATGTTCGCCCCTTGATTAATCTCCCCATCTCAGATCAAACCGCTCAAGCTCTCACAGAAGTCGAAGCATTTGTCCTAACAGCAGAAGACTTGAAATTCTTGATCTCTAAGCTCCGGCTACAACACGGCGTGAAGCTCCGTCACATTATGAGATTTTACTCAACACAATGGAGGACTTGGGCAGCTTATGCCATCCAAATGGCATGGCGTCATTACGCCAAAAGGAAGCTTGAAGAATCACTTCGAGAAGAAGAGATAAGATTGCAAGATGCATTGGCAAACACTTGTGGAAGATCTACAAGCATAGGTGCTACTGTTTATGTATCTCGATTTACTGCTAATGCTCTTAGTTTAATCCGAGGTCGGAAAGCCAAAGAGGCCGAGATAATTACAGCCATGCATCTTCAGAAGCCGGCCGAGCCTGATTTTGTAGGGGAGGATAGTAGTTATAGGTGTAGGTAA 1941 41.16 MLSENTRKSFRRVREHRGSFLQLASCVIAVSLDPFFFYIPVINDHEKCFDFDKKLRIAALVLRSVTDIIFMFHIAFQFRTGYVARPNLFHIAGVNDEVPSSWEIPKTYMLSYFLIDILSLLPLPQVVILSIIPEMKGSKSLIARNILIAIVLLQYVPRVVRIYPLYKKLTWTPRIFKGTLWTKAALNLFLYMLASHVLGALWYFFSIEREMTCWLEACEGHPGCDHSSFFCDDVIRATEFLHDMCPIDTPNTNLFDFGIFLDALQSGIVESVNLPQKLFRCLWWGLQNLSSLGQNLKTSTYVWENIFAVFISTSGLVLFLYFIGNMQTYMQLKTVKKEEKRMEIRSKAEAVDLWMSNNGLPDRFKRRIKHCVEKKWHEIRTVDSENLIPILPMDLQKDIKCFLGSNLVLRVPVFALMDDQLLDAMCGCLKPVVYSTESYIIRKGDPVEEMCFIFRGKVLLWLTNTNVGRTEFFSSVKLQTGDFCGEELLTWAFNVRPLINLPISDQTAQALTEVEAFVLTAEDLKFLISKLRLQHGVKLRHIMRFYSTQWRTWAAYAIQMAWRHYAKRKLEESLREEEIRLQDALANTCGRSTSIGATVYVSRFTANALSLIRGRKAKEAEIITAMHLQKPAEPDFVGEDSSYRCR 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15746149 15749437 + Bpe021854.1 Bpe07g01010 106779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01010 646 CDD CAP_ED 413 530 IPR000595 -
Bpe07g01010 646 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 23 638 - -
Bpe07g01010 646 SMART cnmp_10 413 546 IPR000595 -
Bpe07g01010 646 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 23 638 - -
Bpe07g01010 646 Gene3D Jelly Rolls 411 532 IPR014710 -
Bpe07g01010 646 SUPERFAMILY cAMP-binding domain-like 339 530 IPR018490 -
Bpe07g01010 646 ProSiteProfiles cAMP/cGMP binding motif profile. 413 489 IPR000595 -
Bpe07g01010 646 Pfam Ion transport protein 27 336 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe07g01010 646 Pfam Cyclic nucleotide-binding domain 432 529 IPR000595 -
Bpe07g01010 646 Coils Coil 567 587 - -
Bpe07g01010 646 Gene3D - 27 332 - -
Bpe07g01010 646 SUPERFAMILY Voltage-gated potassium channels 22 331 - -
Bpe07g01010 646 Gene3D Helix hairpin bin 338 402 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01010 Bpe-Chr7:15746149 Bpe10g00594 Bpe-Chr10:12858504 8.31E-171 dispersed
Bpe12g00381 Bpe-Chr12:9134036 Bpe07g01010 Bpe-Chr7:15746149 0 wgd
Bpe03g00239 Bpe-Chr3:3180852 Bpe07g01010 Bpe-Chr7:15746149 6.51E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01010 K05391 - sind:105160375 718.768