Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01014 ATGATGGACTTGGAAAGCATCGAGTGCGTTTCATCTTCCGATGGTTTCGATGATGGTGAAATCCATCAACACCGTACCCTTCACTCGCATCCGCATCCGCATCCGCATCCGCATCCTCTTCTTCACCCTGACATTTCGGCGTCGAAGCCTCGCAGTAGCGCCAACAGTGGCGGTATAACGGGATCAACTGCCATTGCTCCGGCCACCAGCGTCCACGAGTTGCTTGAGTGCCCTGTCTGCACTAATTCTATGTACCCACCAATCCATCAGTGTCATAATGGACATACTTTGTGTTCCACCTGCAAAACGAGGGTTCACAACCGCTGCCCCACTTGTCGACAAGAGCTGGGAGACATTAGGTGTCTAGCTCTAGAAAAAGTGGCCGAGTCACTCGAGCTTCCTTGCAAGTATTACTCCTTGGGATGCCCTGAAATCTTCCCGTATTACAGCAAACTTAAGCACGAGGCAATGTGCAACTTCAGACCGTATACTTGTCCTTATGCTGGATCCGAGTGCTTGGTCGTGGGCGATATTCCTTTCTTGGTTGCTCATCTGAGGGACGATCACAAAGTGGACATGCACACTGGCTGTACATTTAATCATCGTTATGTAAAATCCAATCCTCGGGAAGTTGAGAATGCCACTTGGATGCTTACTGTTTTCCATTGTTTTGGTCAATATTTTTGCCTCCATTTTGAGGCCTTCCAGCTCGGGATGGCTCCGGTTTACATGGCATTCCTGCGATTCATGGGGGATGAGAGTGAGGCTCAGAACTACAGCTATAGCCTGGAGGTGGGAGGGAGTGGAAGAAAACTAATATGGGAAGGAACTCCACGGAGCGTAAGGGACAGCCATCGGAAAGTGAGAGACAGCCACGACGGCCTCATAATTCAAAGAAACATGGCGCTTTTCTTCTCCGGCGGAGACAAAAAGGAGCTGAAATTGAGAGTTACTGGAAGAATTTGGAAGGAACACCAAAACCCAGATGCTGGAGTTTGTATACCAAACCTTTGCAGTTGA 1020 49.12 MMDLESIECVSSSDGFDDGEIHQHRTLHSHPHPHPHPHPLLHPDISASKPRSSANSGGITGSTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEAMCNFRPYTCPYAGSECLVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEAQNYSYSLEVGGSGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEHQNPDAGVCIPNLCS 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15768477 15770261 - Bpe021857.2 Bpe07g01014 106783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01014 339 MobiDBLite consensus disorder prediction 11 61 - -
Bpe07g01014 339 ProSiteProfiles Zinc finger RING-type profile. 77 113 IPR001841 -
Bpe07g01014 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 183 IPR013083 -
Bpe07g01014 339 Pfam Seven in absentia protein family 119 318 IPR018121 GO:0005737|GO:0006511|GO:0007275
Bpe07g01014 339 SUPERFAMILY TRAF domain-like 130 322 - -
Bpe07g01014 339 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 2 330 - -
Bpe07g01014 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 129 IPR013083 -
Bpe07g01014 339 CDD Sina 191 319 - -
Bpe07g01014 339 SUPERFAMILY RING/U-box 66 119 - -
Bpe07g01014 339 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 184 318 IPR008974 GO:0005515
Bpe07g01014 339 ProSiteProfiles Zinc finger SIAH-type profile. 130 190 IPR013010 GO:0008270
Bpe07g01014 339 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 2 330 - -
Bpe07g01014 339 CDD RING-HC_SIAHs 75 113 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00232 Bpe07g01014 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01154 Bpe-Chr3:30581124 Bpe07g01014 Bpe-Chr7:15768477 5.42E-160 dispersed
Bpe04g01449 Bpe-Chr4:21132475 Bpe07g01014 Bpe-Chr7:15768477 5.80E-161 dispersed
Bpe04g01960 Bpe-Chr4:24474177 Bpe07g01014 Bpe-Chr7:15768477 3.55E-169 dispersed
Bpe07g01014 Bpe-Chr7:15768477 Bpe14g00945 Bpe-Chr14:7028123 0 dispersed
Bpe13g00984 Bpe-Chr13:15613363 Bpe07g01014 Bpe-Chr7:15768477 0 wgd
Bpe03g00232 Bpe-Chr3:3103483 Bpe07g01014 Bpe-Chr7:15768477 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01014 K04506 - fve:101313744 627.091