Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe07g01014 | ATGATGGACTTGGAAAGCATCGAGTGCGTTTCATCTTCCGATGGTTTCGATGATGGTGAAATCCATCAACACCGTACCCTTCACTCGCATCCGCATCCGCATCCGCATCCGCATCCTCTTCTTCACCCTGACATTTCGGCGTCGAAGCCTCGCAGTAGCGCCAACAGTGGCGGTATAACGGGATCAACTGCCATTGCTCCGGCCACCAGCGTCCACGAGTTGCTTGAGTGCCCTGTCTGCACTAATTCTATGTACCCACCAATCCATCAGTGTCATAATGGACATACTTTGTGTTCCACCTGCAAAACGAGGGTTCACAACCGCTGCCCCACTTGTCGACAAGAGCTGGGAGACATTAGGTGTCTAGCTCTAGAAAAAGTGGCCGAGTCACTCGAGCTTCCTTGCAAGTATTACTCCTTGGGATGCCCTGAAATCTTCCCGTATTACAGCAAACTTAAGCACGAGGCAATGTGCAACTTCAGACCGTATACTTGTCCTTATGCTGGATCCGAGTGCTTGGTCGTGGGCGATATTCCTTTCTTGGTTGCTCATCTGAGGGACGATCACAAAGTGGACATGCACACTGGCTGTACATTTAATCATCGTTATGTAAAATCCAATCCTCGGGAAGTTGAGAATGCCACTTGGATGCTTACTGTTTTCCATTGTTTTGGTCAATATTTTTGCCTCCATTTTGAGGCCTTCCAGCTCGGGATGGCTCCGGTTTACATGGCATTCCTGCGATTCATGGGGGATGAGAGTGAGGCTCAGAACTACAGCTATAGCCTGGAGGTGGGAGGGAGTGGAAGAAAACTAATATGGGAAGGAACTCCACGGAGCGTAAGGGACAGCCATCGGAAAGTGAGAGACAGCCACGACGGCCTCATAATTCAAAGAAACATGGCGCTTTTCTTCTCCGGCGGAGACAAAAAGGAGCTGAAATTGAGAGTTACTGGAAGAATTTGGAAGGAACACCAAAACCCAGATGCTGGAGTTTGTATACCAAACCTTTGCAGTTGA | 1020 | 49.12 | MMDLESIECVSSSDGFDDGEIHQHRTLHSHPHPHPHPHPLLHPDISASKPRSSANSGGITGSTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEAMCNFRPYTCPYAGSECLVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEAQNYSYSLEVGGSGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEHQNPDAGVCIPNLCS | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 15768477 | 15770261 | - | Bpe021857.2 | Bpe07g01014 | 106783 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe07g01014 | 339 | MobiDBLite | consensus disorder prediction | 11 | 61 | - | - | |
Bpe07g01014 | 339 | ProSiteProfiles | Zinc finger RING-type profile. | 77 | 113 | IPR001841 | - | |
Bpe07g01014 | 339 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 130 | 183 | IPR013083 | - | |
Bpe07g01014 | 339 | Pfam | Seven in absentia protein family | 119 | 318 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Bpe07g01014 | 339 | SUPERFAMILY | TRAF domain-like | 130 | 322 | - | - | |
Bpe07g01014 | 339 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE | 2 | 330 | - | - | |
Bpe07g01014 | 339 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 129 | IPR013083 | - | |
Bpe07g01014 | 339 | CDD | Sina | 191 | 319 | - | - | |
Bpe07g01014 | 339 | SUPERFAMILY | RING/U-box | 66 | 119 | - | - | |
Bpe07g01014 | 339 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 184 | 318 | IPR008974 | GO:0005515 | |
Bpe07g01014 | 339 | ProSiteProfiles | Zinc finger SIAH-type profile. | 130 | 190 | IPR013010 | GO:0008270 | |
Bpe07g01014 | 339 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 2 | 330 | - | - | |
Bpe07g01014 | 339 | CDD | RING-HC_SIAHs | 75 | 113 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g00232 | Bpe07g01014 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g01154 | Bpe-Chr3:30581124 | Bpe07g01014 | Bpe-Chr7:15768477 | 5.42E-160 | dispersed | |
Bpe04g01449 | Bpe-Chr4:21132475 | Bpe07g01014 | Bpe-Chr7:15768477 | 5.80E-161 | dispersed | |
Bpe04g01960 | Bpe-Chr4:24474177 | Bpe07g01014 | Bpe-Chr7:15768477 | 3.55E-169 | dispersed | |
Bpe07g01014 | Bpe-Chr7:15768477 | Bpe14g00945 | Bpe-Chr14:7028123 | 0 | dispersed | |
Bpe13g00984 | Bpe-Chr13:15613363 | Bpe07g01014 | Bpe-Chr7:15768477 | 0 | wgd | |
Bpe03g00232 | Bpe-Chr3:3103483 | Bpe07g01014 | Bpe-Chr7:15768477 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe07g01014 | K04506 | - | fve:101313744 | 627.091 |