Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01028 ATGGAGGCCGCGCCCACCCAACGCGCGGGTTCATTGCAGACATACCGCCCTCAAAATAAGTGGACCTCTATTTCCGTTATTGATGCCGGGAACGAGGAATTGGAAAATTCGAAGACAGGGAAATCAGAAGTCAAAACAATCTATGAGGTGCAGCAGAGACGAGAACCTTTTGACATGAACCTATGTTCAACATCAATTGATGGAAATCTCGATAATGATATTTTGCAGCAGAGATTGCATGGTGTTGCTAGACAAAGAGATGAATTGCAACAAATGGAGATTGAGCTTCAAGCTCAAATTATTGCAAGATCTGAGATAATTGATATGCAGAACAAATTTGAAGCTCAAATTAAAGAACATAGTGATTCTCTGATCGAGCTTCAGGAACAACTGTGTGGAAGGGATCAGACCATTTGTGAATTGGAACGAAAAATTGAAGATAAAGATAGAGAGCTCCATGCAATTAAATTAGACAATGAAGCGGCTTGGGCTAAAGAGGATCTCTTTAGGGAACAAGATGAAGAAGTAGCAACATATAGAAGAGAGCGAGATCATTCTGAAGCTGAAAGGTCTCAACATATTAAACAAATACAAGACCTTAAGGAGCATATTTTAGAGAAGGAGAGGCAGATTATTGACTTACAAGAACAGCAAAGGGTTTCTCAAGAAACTATTGTCTATAAAGATGAACAATTAAGGGAAGCCCATGCCTGGATTGCTCGAGTTCAGGAGATAGATGTTTTGCAGTCAACTACAAATCATTCATTGCAAGCTGAATTACGGGAGCGAACAGAACACTACAATCAACTATGGCTTGGCTGCCAACGACAGTTTGCGGAAATGGAAAGACATCATTTGCATTCAATTCAGCAGCTTCAACTTGAGCTGGCTGATGCAAGAGGGAGGAGTGGAACATACATTGATGGGTCACGAACTTCCATGAAAAATTTAAAAGACGATTCTCAATATGTAAAAAACAATGGATCCAACTTAGATTCTGATGGAAGTTCAACCCCCAGTGGAAATACAGGGGCTTTATTGAATGGGAGCTCAGATGACGTTTTGTCCTTTGTTTCAACTGGGAATGCATTAAGTCAGGTGACATCTATTCATCCATTTGTAATGCATCAACAGAGTGGTCCTTCTTCCATTGTCAATAATTTTCACCCAGCATCAGCAGTTTCGTCCATCCAAAGGTGGCATGGTCAGTCGATGCCAGAGAATGAACTTCAATTATCCCAAAATGATGAACAACTAACAAAATCAACTGCTAAAGCGGGCGATGACATGTCTGTTAATGGGCTAGCTCTGGATCCGGATGATTTGAATGGTCAAAATGCCGAAATAGGGAGGCTTGATTCAGTGCCTTCACTATCAACTGAAGGAACACAGGTTGACTCTATTGATCGAGGCCCCTTGGTTGTCTCTGAACCTGAACGGAGCCTGCAGCATTTTTCCTCCCAATTTCACAACGCTTTGAGACTAGATTCTTTTGAACATAAGATAGAAACACAGGAGCAAAATGTTCTGAGTTCCGATGGTTATGCAGAAGGGAAAACAGCAAGTGGAGTGCAACCAAGTTATACTGTTAATAAATCTCCATCTGATGTTACTTCCCCACACTCCATTAATCTTATTGAGTTTGGCATTGATAAAACTCCTCGACCTGTTCCAACTGGAGCTTTTGCTCCGGATTCACCAAGGGTTCTCATGGCCCCTGAAACCCCCCTTCTGGATGAAAAATCATTGCTTGCTTGCATAGTTAGAACTATTCCACCAGGTGGTAGAATTCAGATTAGTTCCACGCTACCTAATAGACTGGTCAAGATGCTTGCACCTCTGCACTGGCGTGATTATCAAAAAACTTACGGAAAGCTTAGCAACTTTGTTTCCAGTCACCCTGAATTATTCGTGATTGAGGGTGATTATATCCAACTCCGGAAAGGGGCGCAAGAAATCATAGCGGCTACAGCAGCTGTTGCTAAGGTTGCTGCAGCGGCGGCATCTTCTTCTCCAGACTCATCACATTTACCTTCTGTGGCTTTGACTCCAATGTCACGAGCTTATCAATTGAGAAAGATTCCATCTGTTGATTCTGAAAATTGCACATTAGTGCAGAACCAACAATTAAATGGTGTTTGCTTTGGCACCCGTGCTGGTCTCTCAAGTTTGAAGCTCCCCAGCAAATCAAAGGATAATGGGGAAATGAATATCCCAGAAACTAAGTCTGGTCAACTATCTGGCTTGAGTATTAATCAAAGCATAGGTTCAACGAATGGGAGACCCAGAAACAATTTTAATGGAAAACATCAGGGCAGGATGGCTGGTCCGGCATTGTCTTCTAGGAGGTAG 2352 42.13 MEAAPTQRAGSLQTYRPQNKWTSISVIDAGNEELENSKTGKSEVKTIYEVQQRREPFDMNLCSTSIDGNLDNDILQQRLHGVARQRDELQQMEIELQAQIIARSEIIDMQNKFEAQIKEHSDSLIELQEQLCGRDQTICELERKIEDKDRELHAIKLDNEAAWAKEDLFREQDEEVATYRRERDHSEAERSQHIKQIQDLKEHILEKERQIIDLQEQQRVSQETIVYKDEQLREAHAWIARVQEIDVLQSTTNHSLQAELRERTEHYNQLWLGCQRQFAEMERHHLHSIQQLQLELADARGRSGTYIDGSRTSMKNLKDDSQYVKNNGSNLDSDGSSTPSGNTGALLNGSSDDVLSFVSTGNALSQVTSIHPFVMHQQSGPSSIVNNFHPASAVSSIQRWHGQSMPENELQLSQNDEQLTKSTAKAGDDMSVNGLALDPDDLNGQNAEIGRLDSVPSLSTEGTQVDSIDRGPLVVSEPERSLQHFSSQFHNALRLDSFEHKIETQEQNVLSSDGYAEGKTASGVQPSYTVNKSPSDVTSPHSINLIEFGIDKTPRPVPTGAFAPDSPRVLMAPETPLLDEKSLLACIVRTIPPGGRIQISSTLPNRLVKMLAPLHWRDYQKTYGKLSNFVSSHPELFVIEGDYIQLRKGAQEIIAATAAVAKVAAAAASSSPDSSHLPSVALTPMSRAYQLRKIPSVDSENCTLVQNQQLNGVCFGTRAGLSSLKLPSKSKDNGEMNIPETKSGQLSGLSINQSIGSTNGRPRNNFNGKHQGRMAGPALSSRR 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15829615 15835713 + Bpe021872.1 Bpe07g01028 106797

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01028 783 MobiDBLite consensus disorder prediction 511 536 - -
Bpe07g01028 783 Coils Coil 169 217 - -
Bpe07g01028 783 MobiDBLite consensus disorder prediction 737 766 - -
Bpe07g01028 783 PANTHER OS08G0543600 PROTEIN 18 783 - -
Bpe07g01028 783 MobiDBLite consensus disorder prediction 306 345 - -
Bpe07g01028 783 Coils Coil 110 130 - -
Bpe07g01028 783 MobiDBLite consensus disorder prediction 725 783 - -
Bpe07g01028 783 PANTHER OS08G0543600 PROTEIN 18 783 - -
Bpe07g01028 783 Coils Coil 72 102 - -
Bpe07g01028 783 MobiDBLite consensus disorder prediction 522 536 - -
Bpe07g01028 783 MobiDBLite consensus disorder prediction 305 345 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01028 - - - qsu:111993978 807.749
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01028 Bpe-Chr7:15829615 Bpe12g00337 Bpe-Chr12:8281647 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g982 Blo06g01050 Blo15g00076 . . . Bpe07g01028 . . . . Cma02g01147 Cma15g01000 Car02g00948 Car15g00935 . Cpe05g00579 . . . . . . . . Cla01g00014 . . Cco01g0015 Clacu01g0015 Cmu01g0015 . Cone1ag1013 Cone5ag0720 . . . Csa05g00002 Chy09g01478 . . . Bda06g00796 Bda15g00797 . . Bma08g00399 Bma12g01223 . Cmo02g01178 Cmo15g01064 . . . . . Cpe13g00335 Bhi12g00691 . . . Hepe06g0825 . . . . . . . . . . . . Cme09g02026
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004264 2 4 2 2 2 0 2 1 0 1 1 1 1 1 1 2 1 2 2 0 1 1 1 1 1 0 1 5 2 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g01028 Bpe_Chr07 FPKM 5.641612 8.953197 0.0 0.0 0.0 0.0 0.0 0.0 0.065922 0.138909