Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01031 ATGGCGCTCGCGATTGCCAATGGCGGTGGCCGATGTAGCGACGCCGGGATCCTCTACAGTAGGCCCAGACAAACCCCGTCCGCCCACCTCCCCTTCCGTCACCGCATTCTCTCTCCGGCAAACCACAGAAACCGGTCGCTCCACGTAGTTCGAGCCAAAAAGCTTTCGCCGCGAACCGGTCGGTTCGATAGCAAGAAGCGGAGGGGATCGACGACGACGACCGACCAGGAAGAGGAAGGAGAAGATGGTGATGAGAACTTGGCGGGTGAAATCGAGAGGAGGGGTGAGCCACCGGAAGATGTTCGGAAAATTGAAAACGTGGGAATTGTCTTCGACGACGAGAAGACCATGCCGAAGCTCCCCGGCGAGGAGCCGGATTTCTGGGAGGGTCCGCAGTGGGACGCCCTCGGTTTTTTTGTTCAGTATTTATGGGCCTTCGGTATCGTCTTCGCGCTGATTGCGTGTGGAATTGCTGTGAGTACATACAACGAAGGAGCTACAGATTTCAAACAAACTCCGGCCTACAAAGAGTCAGTTGAATCTCGAGATCTGTTGGAAGAACCAGAGGCTTCAAGTCCTGATGTGTTCGAAACCAACCCCACTGAGGTTGCGCCCAGCTTGGATTAA 627 55.34 MALAIANGGGRCSDAGILYSRPRQTPSAHLPFRHRILSPANHRNRSLHVVRAKKLSPRTGRFDSKKRRGSTTTTDQEEEGEDGDENLAGEIERRGEPPEDVRKIENVGIVFDDEKTMPKLPGEEPDFWEGPQWDALGFFVQYLWAFGIVFALIACGIAVSTYNEGATDFKQTPAYKESVESRDLLEEPEASSPDVFETNPTEVAPSLD 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15852144 15852976 + Bpe021875.1 Bpe07g01031 106800

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01031 208 MobiDBLite consensus disorder prediction 172 208 - -
Bpe07g01031 208 MobiDBLite consensus disorder prediction 175 189 - -
Bpe07g01031 208 MobiDBLite consensus disorder prediction 58 75 - -
Bpe07g01031 208 MobiDBLite consensus disorder prediction 194 208 - -
Bpe07g01031 208 MobiDBLite consensus disorder prediction 58 96 - -
Bpe07g01031 208 PANTHER AT-RICH INTERACTIVE DOMAIN PROTEIN 1 207 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01031 - - - hbr:110647707 246.514
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g333 . . Bda06g00801 . . . . Bma12g01227 . . Cma10g00240 . Car10g00226 . . . . . . . . . . . Cla06g01475 Cam06g1629 Cec06g1691 Cco06g1685 Clacu06g1594 Cmu06g1544 Cre06g2356 . . Cone13ag0289 Cone19ag0274 . . . . . Blo15g00075 . . Bpe07g01031 . . . . Cmo10g00254 . . . . . . Cpe18g00753 . . . . . . . . . . . . . . Lsi06g01338 Csa01g00375 Chy02g02369 Cme02g01753
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011206 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g01031 Bpe_Chr07 FPKM 48.72673 47.479897 5.677574 3.307159 39.348705 33.422558 41.088711 9.315925 9.010966 6.886548