Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01036 ATGGCTGTGGCAAGCAAACCCAGAAGCATTCTTGAAGGTCTTGTTAGAGAAAGTTCATTCAAATGGTTGCTTAGGAATCGGCGTTCTTTCGGAGAAGAATTTGAGGAGTTTGGAAAGTCACCTTCTGCCAGAAAGAATTGGATTTCTGAGCTATCTCCAGCTGCCAATGTAGTTGTCCGGAGATGCTCAAAAATTCTTGGCATTTCTTCTAGTGAACTTCAAGAAAGCTTCAATGCAGAAGCTTTTGATTCTATAAAACATCCGTCTAATTACGCGAGGAACTTTTTGGAGTACTGCTGTTTCAGGGCACTTGCTTTATCGACACAAGTCGCTGGTTATTTGACTGATAAAAAATTTCGACAACTCACATATGACATGATGCTGGCTTGGGAAGCTCCTGCTGCGTGCAACCAACCCTCAATCATGTCTTTGATTTTATCCACCTCCACCGATTTCTTTTTACTAGTTGACGAAGAACTAACAGTTGGTTTGGAGGCATTCTCTCGAATTGCTGCAGCAGTTCCTTTAATTGCAAATGTGATTGTAAGTGAAAATCTTTTCAAGGTGCTTACATCATCAGCTGGTGGTAGGCTTGGGTTTGCCATGTATGACAACATTTTCCCATATAAGGCTAATTATTTTCTCTGTAGAGCTATTCGGAAAATGAAAAACCAGTCAGACTCGAATCTTCTTGATGCCGTTCGATCAGCAAGAGGGGAAAAGATTCTAGAGGTTGATGGAACTGTCACAACTCAACCAGTTCTTGAACATGTAGGAATTTCTACTTGGCCTGGTCGGTTGACTCTGACAGACCATGCGCTTTACTTTGAACCTCTACGTGTTGTTTCCTATGACAAAGCCAAACAGTATGACTTATCAGATGATTTAAAGCAAGTTGTAAAACCTGAGTTGACTGGTCCGTGGGGCACTCGACTTTTTGACAAGGCAGTTTCATATAACTCAGTTTCTTTATCAGAATCAGTGATGCTAGAGTTTCCAGAGCTTAAAGGCCACGCACGACGTGATTATTGGCTAGCAATTATCCGGGAAATTTTATATGCTCATAGATTTATAAATACTTACCAGATTAAGGGAGTTCAACGAGATGAAGCCCTCTCAAAGGCAGTTCTTGGAATTCTGCGAGTTCAAGCCATTCGGGATGTTTTTTCTACGACTCCTCTAAGGAGTGAGGCTCTTCTGATATTCAATCATTGCGATCAACTTCCAGGTGGGGATTTAATACTAGAAACACTAGCACGGATGTCAAACTCCAGAGAGGTTGATCAGACAAATAAATCAATGGCTGAAAGTAGGATGTATTCGATTTCTGCTCTCGACATAATTTCAAACCTAGGGTTTGGTTTGGGATCGACTTCAAATTGTACGAGCGATACTGGGCTTGTTGTGGGTGAGATTGCTGTTGGCACAATGACTACTCTAGAGAGGGCAGTCAAGGAGTCCAAGATCAATTATGAAAAGGTGGTGCTAGCTCAATCATCTGTCAATGGAGTTAAAGTAGATGGCCTTGATACAAATTTGGTAGTGATGAAGGAGTTGTTGTTTCCGGTAACTCAACTTGGGAAGTGTCTTCTTTCTCTTGCGTATTGGGATGATCCATTGAAGTCTTTGGTGTTCATCTTGATTTTCAGTTTCATCATTTTGAGGGAATGGCTGAGTTATGCAGTTGCTTTGACACTTGCATTTCTGGCAGTTTTCATCATACTCACTCGATTTTATAACCGGGGGAGGCCCATCGACAAAGTTAAGGTTATAGCTCCTCCCCCCATGAACACAATGGAACAACTTTTGGCTGTTCAGAACGTGATTTCACAAGCCGGGCAGGTTATCCAGGATGGTAACATAGTTCTTCTGAAGCTACGTGCCTTGTTGCTGGCCATTTTCCCTCAGGTTTTCCTCATTTTCTCCATGCAAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGCTTATCGGGTTTTCGTGTAATCGATCAGGCATCAGAGAAGTTTGCATTTGCTCTGCTACTAGTGGCCTCGATGCTGGCCTTTGTACCGAGCAAGTACATAATGTTGGCAGTGTTCATGGACATGTTCACAAGGTATTCGCCTGCGAGAAAAGCTAGCGTGGAGAAATGGATGAGGAGGTTCAGAGAATGTAAAATGCACGGAGGAAGACGAAGAGGGAGGAGGAGGAGCTTCAAATCGGAAGAGGCTTTAGAATTTCTGTACCAGAGAGTGGTTCTGAATCCTTTTCTTCCATATTCAGTATCTTTTATTTTGGTTGTTTGGGCGATTGAGCGATGGGTTATCTCTTTCTCCAATTGGCTCCCACTTGCCTTTGCAGTATGGGCCACCGTTCAGTATGGAAATTATCAACGCCACATAATCACCGAAGAGTTGACTAAAAAGTGGAATCGAATCATTCTGGAAACTTCGTCGATAACAACAGTGGAGCATTGTGAATGGCTGAATAAACTGTTGATGGAAGTATGGTCTAGCTATATGAACCCCAAACTTTCGATTAGGTTCTCCTCCATCATTGAGGTGAGAATTCCTAATCCTTTGTATATTTTTCTCCATACAATTGAGCTGCTAGAGTTTTCTCTTGGCTCACATCCTCCTATCTTGGGTCTTCATGGTACTCAATGGTCAACTTGTGGTAATCAGAAAATCATGCGTTTAAATTTCGATTGGGATGCAAAAGAAATGAGTATTTTGTTACAAGCTAAGCTAGGCAGGCCGTTTATTGGAACTGCACGGATCGTTATCAATAGCCTGCACATAAAGGGTGATCTGCTTTTGAGGCCAATTCTGGATGGAAAAGCCATACTTTATTCATTTGTGTCCACTCCTGATGTACGAATTGGAGTTGCTTTTGGAAGTGGTGGAAGCCAATCATTACCTGCCACTGAGCTGCCTGGTGTATCGTTTTGGTTGGTTAAAATTTTTACCGACACTTTGGTTAAGACAATGGTTGAACCTCGGCGACAATGCTTTGCATTACCAGCTGTAGACTTGAGAAAAACAGTTGTTGGCGGTGTTATATTTGTGACTGTTGTATCTGCCAGTAACCTTTCGAGATATGGCTTGAGAGGAAGCCCATCAAAGCAGCATACTGATTCTTTGAATGGTACACCAGAGGAGCAGTTTAGGAAGAAAAATCTTGAGACATTTGTTGAGGTTGAACTTGGGGATCTAAGTCGAAGAACTGGTACGAGATCAGGCTCGAGTCCTGTATGGGACTCGACATTTAACATGATTTTGCATGAAGAAACGGAAATTCTTCGATTCCATCTTTACGAGTCCAATTCAAACCATGTGAAGTATGACTATCTAACCAGTTGTGAGATTAAGATGAAGTATGTTGCAGACGATTCAATGACAATTTGGGCAATAGGAAATGACTCTGGTGTTATTGCAAAACATGCCGAGTGTTACGGAAAAGAAATTGAAATTGTTGTTCCATTCGAAGGGGTCAGTTGTGGGGAGTTGACAGTAAGGCTTGCCTTGAAGGAATGGCAATTTTCTGGAGGTTCGTACGGCTTGAACCGTCTTCGTTTAAGCTCCCAGCAATTCCTCTATGGATCACCAAATTTTCTTCCAAGAACTGGAAGAAAAATTAACGTAACTGTTGTGGAAGGAAAGGATCTTATTGTGAAAGACAGATCAGGAAAATCTGTTCTATATGTTAAGATGCAATACGGCAAGGTTCTCCAGAAAACAAAGACTGCTCAATCTTATAATCCTATTTGGAATCAGATATTTGAATTCAACGAGATAGGAGGTGGTGAATACCTTAAGATAAAGTGTCATAGTGAAGATGTCTTTTACGATGATGGTATCGGCAGTGCTCGAGTAAATTTGGAAGGACTGGTAGATGGATTAATTCGAGACGTATGGATTCCCCTCGAGAAAGGTTCAAGGAATGGCTGGATTGAACTTCTTCTAATTGAAGCAAAAGATCTTGTAGCAGCTGATCTCAGGGGAACAAGTGATCCTTATGTGAGGGTTCATTATGGAAGCTTGAAGAAAAGAATTAAGGTTGTGTACAAAACTCTGAATCCCCATTGGAATCAGACCTTGGAGTTTGCTGATGATGGAAGCCCTCTAGTGTTATATGTGAAAGACCACAATGCTCTATTACCCACATCTAGTTTAGGGAATTGTACAGTTGAATATCAAAGTTTGCCTCTTAATCAAATGTCCGATGAGTGGATACCCCTTCGAGGGGTGAAAAGTGGTGAAATTCACGTCCAAATCACGAGAAAAGTTCCCGAAGTAGATACCCGACTCGGCTTGGAGTCTCGACTATCCATCACCAAAGCTCATCAAATTTCTGGTCAGATGAAGCATACGATCAAGAGGTTTCGAATGCTGATCGAGGACGGCAACGAAGAACTTTCAATGGCATTGATGGAGTTGGAAGGGGCGGAGGAGATGCAAAGGGAGTATATGTTGCAGCTCGAAACCGAGCAAATGCTTCTGCTAAACAGAATGAAGGAGATTGGTGAGGAGATTTTCAATTCATGTCCATCTTTAAGTACAAAATCTTCTCCCAATTGA 4563 41.95 MAVASKPRSILEGLVRESSFKWLLRNRRSFGEEFEEFGKSPSARKNWISELSPAANVVVRRCSKILGISSSELQESFNAEAFDSIKHPSNYARNFLEYCCFRALALSTQVAGYLTDKKFRQLTYDMMLAWEAPAACNQPSIMSLILSTSTDFFLLVDEELTVGLEAFSRIAAAVPLIANVIVSENLFKVLTSSAGGRLGFAMYDNIFPYKANYFLCRAIRKMKNQSDSNLLDAVRSARGEKILEVDGTVTTQPVLEHVGISTWPGRLTLTDHALYFEPLRVVSYDKAKQYDLSDDLKQVVKPELTGPWGTRLFDKAVSYNSVSLSESVMLEFPELKGHARRDYWLAIIREILYAHRFINTYQIKGVQRDEALSKAVLGILRVQAIRDVFSTTPLRSEALLIFNHCDQLPGGDLILETLARMSNSREVDQTNKSMAESRMYSISALDIISNLGFGLGSTSNCTSDTGLVVGEIAVGTMTTLERAVKESKINYEKVVLAQSSVNGVKVDGLDTNLVVMKELLFPVTQLGKCLLSLAYWDDPLKSLVFILIFSFIILREWLSYAVALTLAFLAVFIILTRFYNRGRPIDKVKVIAPPPMNTMEQLLAVQNVISQAGQVIQDGNIVLLKLRALLLAIFPQVFLIFSMQILSLSLSLSLFCLSGFRVIDQASEKFAFALLLVASMLAFVPSKYIMLAVFMDMFTRYSPARKASVEKWMRRFRECKMHGGRRRGRRRSFKSEEALEFLYQRVVLNPFLPYSVSFILVVWAIERWVISFSNWLPLAFAVWATVQYGNYQRHIITEELTKKWNRIILETSSITTVEHCEWLNKLLMEVWSSYMNPKLSIRFSSIIEVRIPNPLYIFLHTIELLEFSLGSHPPILGLHGTQWSTCGNQKIMRLNFDWDAKEMSILLQAKLGRPFIGTARIVINSLHIKGDLLLRPILDGKAILYSFVSTPDVRIGVAFGSGGSQSLPATELPGVSFWLVKIFTDTLVKTMVEPRRQCFALPAVDLRKTVVGGVIFVTVVSASNLSRYGLRGSPSKQHTDSLNGTPEEQFRKKNLETFVEVELGDLSRRTGTRSGSSPVWDSTFNMILHEETEILRFHLYESNSNHVKYDYLTSCEIKMKYVADDSMTIWAIGNDSGVIAKHAECYGKEIEIVVPFEGVSCGELTVRLALKEWQFSGGSYGLNRLRLSSQQFLYGSPNFLPRTGRKINVTVVEGKDLIVKDRSGKSVLYVKMQYGKVLQKTKTAQSYNPIWNQIFEFNEIGGGEYLKIKCHSEDVFYDDGIGSARVNLEGLVDGLIRDVWIPLEKGSRNGWIELLLIEAKDLVAADLRGTSDPYVRVHYGSLKKRIKVVYKTLNPHWNQTLEFADDGSPLVLYVKDHNALLPTSSLGNCTVEYQSLPLNQMSDEWIPLRGVKSGEIHVQITRKVPEVDTRLGLESRLSITKAHQISGQMKHTIKRFRMLIEDGNEELSMALMELEGAEEMQREYMLQLETEQMLLLNRMKEIGEEIFNSCPSLSTKSSPN 1520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15874375 15885804 - Bpe021880.1 Bpe07g01036 106805

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01036 1520 SMART C2_3c 1014 1131 IPR000008 -
Bpe07g01036 1520 SMART C2_3c 1206 1300 IPR000008 -
Bpe07g01036 1520 SMART C2_3c 1311 1405 IPR000008 -
Bpe07g01036 1520 Pfam C2 domain 1313 1408 IPR000008 -
Bpe07g01036 1520 Pfam C2 domain 1015 1121 IPR000008 -
Bpe07g01036 1520 Pfam C2 domain 1206 1303 IPR000008 -
Bpe07g01036 1520 Gene3D C2 domain 1005 1137 IPR035892 -
Bpe07g01036 1520 Pfam Plant protein of unknown function (DUF639) 478 650 IPR006927 -
Bpe07g01036 1520 Pfam Plant protein of unknown function (DUF639) 663 718 IPR006927 -
Bpe07g01036 1520 PANTHER PLANT SYNAPTOTAGMIN 746 1516 - -
Bpe07g01036 1520 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1205 1313 IPR035892 -
Bpe07g01036 1520 Coils Coil 1460 1480 - -
Bpe07g01036 1520 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1309 1421 IPR035892 -
Bpe07g01036 1520 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1008 1125 IPR035892 -
Bpe07g01036 1520 CDD C2 1312 1408 - -
Bpe07g01036 1520 CDD C2 1207 1303 - -
Bpe07g01036 1520 ProSiteProfiles C2 domain profile. 996 1131 IPR000008 -
Bpe07g01036 1520 CDD C2 1015 1129 - -
Bpe07g01036 1520 Gene3D C2 domain 1195 1311 IPR035892 -
Bpe07g01036 1520 Gene3D C2 domain 1312 1423 IPR035892 -
Bpe07g01036 1520 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 816 1002 IPR031468 GO:0008289
Bpe07g01036 1520 PANTHER OS01G0128800 PROTEIN 746 1516 - -
Bpe07g01036 1520 ProSiteProfiles C2 domain profile. 1292 1406 IPR000008 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01036 - - - fve:101295049 1063.52
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe07g01036 Bpe12g00692 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01036 Bpe-Chr7:15874375 Bpe12g00692 Bpe-Chr12:12499591 0 dispersed
Bpe07g01036 Bpe-Chr7:15874375 Bpe04g01366 Bpe-Chr4:20275938 5.87E-83 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g315 . . Bda06g00807 Bda15g00515 Bpe12g00692 . . Bma12g01232 . . Cma10g00231 Cma11g00277 Car10g00216 Car11g00252 . . Cpe04g01401 . . . . . . . Cla06g01464 Cam06g1617 Cec06g1679 Cco06g1672 Clacu06g1581 Cmu06g1532 Cre06g2344 . . . . . . . . Blo13g00167 Blo15g00069 . . Bpe07g01036 . . Bma08g00061 . . Cmo11g00281 . . . . . Cpe18g00761 . . . . . . . . . . . . . . Lsi06g01327 Csa01g00389 Chy02g02358 Cme02g01736
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0019480 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe07g01036 Bpe_Chr07 FPKM 6.551753 6.01871 7.114261 6.381201 7.801454 6.523339 7.358154 10.996649 11.036849 11.729698