Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01039 ATGGCGACTCCTTTTACGGGATTGCAGCTCAGAGACGGAGGCGGAGTTGCAGTGCTGTCGAATTCAGTGAATAAGGTAGATGCGTCTTCGTCTCCGTCACCGCCTCCATCGTCTTCAAATGGTGGTTGTTTGAGGAGCTCCGAGCCTAAGTCTCCCATTCTGATTTTTTTGTTCTTTCACAAAGCGATTCGTTATGAGCTTGATGCGCTTCACATGTTCGCCATGGCCCTCGCTACTGGCCAGCGAACGGATATTCAGCCTCTTATCAAGCGATACCATTTTCTCAGATCAATTTACAAACATCACTCCAATGCCGAAGACGAGGTAATTTTTCCAGCACTTGACATTCGTGTGAAGAATGTAGCTCAAACATACTCTCTCGAGCACAAAGGAGAAAGCAACCTTTTTGATCATCTTTTTGAGCTTCTTAATTCAAGTACACAAGATGATGAATGCTTATCTCGGGAGTTGGCATCTTGTACCAGAGCATTAAGGACATCAGTTAGCCAACACATGGCCAAGGAAGAAGAGCAGGTCTTTCCCTTGCTCATGGAGAAGTTCTCTCTTGATGAGCAAGCGTCTCTGGTCTGGCAATTATTTTGCAGCATTCCTGTGAATATGATGGCTGAATTTCTTCCTTGGCTAGCATCATCTATTTCACCAGATGAATCTCAGGATCTGCGGAAGTGTTTGAGCAAGATAGTTCCCAAGGAAAAGCTTCTTCAACAGGTCGTATTTACGTGGATGGAAGGGAGAAACGGTGCCATCGGTGCTGAAAGTCCCATAGATGATTCTTTTGGTGGATGTTGTGTTGATACTAGAATTTGCATATCATCCCAGGAAACAGAAAAAGTAAAGAGAGCTTGTGTAGAGATGACTACTGGAAAAAGGAAACATATTGACTTTAGTGATGATACTACTGATGTCATGGAGACACATCCAATAAATGAAATATTGCTTTGGCACAATGCGATCAAAAAGGAGTTGACTGAGATAGCGGAAGAGGCTAGGAAAATACAACTTTCTGGAAATTTTGATAATCTTTCAGCCTTCAATGAGAGACTGCATTTCATTGCTGAAGTTTGCGTCTTTCACAGTATTGCTGAAGACAAGGTTATCTTTCCGGCAGTAGATGGAGAGTTATCCTTTCTTCAGGAGCATGCTGAAGAAGAAAGTCAATTTAATGAATTCAGGTCGTTGATGGAAGAAGGAATTCAAAGTGATGGATCAGTGTCTAATTCAACAGCTGAATTTTACTCAAAGTTGTGTTCGCTTGCTGATCAAATTATTGATACAATTCAGAGGCACTTCAATAATGAGGAACTCCAGGTTCTTCCACTTGCTCGAAAGCACTTTAGCCTCAAACAACAGCGGGAACTTCTGTATCGTAGCTTGTGCATGATGCCCCTGAAATTAATTGAGCGTGTCTTGCCATGGCTGATTGGGTCATTATCAGAAGATGAAGCTGGAAATCTTCTGAAAAACATCCAATTGGCAGCTCCAACATCTGATACTGCTTTAGTGACACTCTTTTCTGGCTGGGCTTGCAAGGCCCGGAACCGAGGGTTATGCTTGTCTTCAAGAGGGACTGGTAGCTGTCCAGTAAAAAGGCTTATTGACATTGAAGAAAATGTTGTTCCATCATTTTGTTCACATGCTTCTGCATTACCTCCAAGAGATAGTAAATCATCAAGTAAAGAAAATAACTTTGAAAGGCCGGCTAAACGAAATGTCTGTGTATCGTGCAAAAATTGTGATGCCTCTAGTTTCTTAGAGGCTGCTAATTTCCAGCATCCTTGCTGTGGTGATGAATCTTGTTGTGTCCCAGGTTTAGGAGTAAAGAGCAATAATCTAGGCTTGAGTTCTCTTTTTGCAACAAAGTCTCTGTGTTCTTTATCTCCCAGCTCTGGGGCCCCTTCTCTCAACTCGAGTCTTTTCTCATGGGAAACCGATATTAACTTTTCTGACATTGAGGCTTCAGGACGACCAATCGATACTATTTTTAAGTTTCATAAAGCTATAAGGAAAGATTTGGAATATTTAGATGTTGAATCTGGAAAGCTTAATCAATGTGATGAGACATTCCTACGGCAATTTAGTGGGAGATTTCGCCTGCTATGGGGATTGTATCGAGCTCATAGTAATGCTGAAGATGATATAGTGTTCCCTGCTCTAGAATCCAAAGAGGCATTGCACAATGTTAGCCACTCGTACACACTGGACCATAGACAGGAGGAAAAGTTATTTGAAGACATTGCAAGTGTTCTTTTGGAACTTTCTCATCTACATGGAAACTCCTCTTTGGATATTGATTCATCTGGAAATCAGCTTGGAAAGCATGTCGAGCTAGCTACAAAGCTTCAAGGAATGTGCAAATCCATAAGAGTGTCACTAGATCAGCATATTTTCAGGGAGGAACTTGAGCTATGGCCATTGTTTGGAAAACATTTCTCCGTGGAGGAGCAAGACAAAATAGTCGGCCGCATTATTGGAACAACAGGTGCAGAAGTACTCCAATCAATGTTACCATGGGTAACTTCAGCACTGACAGAGGACGAACAAAATATAATGATGGATACTTGGAAGCAAGCCGCAAAGAATACTATGTTCAATGAGTGGCTCAATGAATGTTGGAAAGGAATTGAGGTGTCTACTTTACGTACGGGGACATTGGAAGCTAATATTGCTCAAAAAGGTATTGAGATTAGAGAAGGCTTGGATCAATGTGATCAGATGTTCAAGCCTGGCTGGAAGGATATTTTTCGAATGAATCAAAATGAGATTGAATCAGAGATTAGAAAGGTCTACCAGGATTTGACTCTTGATCCAAGAAGAAAGGCGTATCTTGTCCAGAATCTTATGACCAGTCGCTGGATTGCCACCCAACAGAAGCTAACAGAAATTACGGTGGCAAGTTCTAATATTGAAGATGTAGCAGGACGTTCACCATCGTATTGTGACCCTAATAAAAGTAAATTTGGGTGTGAGCATTACAAAAGAAACTGCAAACTCCGTGCTGCTTGCTGTGGCAAGTTGTTTACATGTCGGTTTTGTCATGATAATGTTAGCGACCACTCTATGGATAGGAAAGCAACCTCTGAGATGATGTGCATGCGCTGTTTGACAATTCAGGCTGTGGGGCCAACATGCTCAACTCCTTCATGCAATGGGTTTTCAATGGCGAAATACTATTGCAATATATGCAGATTTTTCGATGATGAAAGAACTGTCTATCATTGCCCATTTTGCAACTTGTGCCGTCTGGGGAGAGGTCTTGGACATGACTTTTTTCACTGCATGACCTGCAATTGTTGTCTGGGAATAAAGATTGTGAACCACAAGTGTCTGGAAAAAAGTTTAGAAACAAATTGTCCTATCTGCTGTGATTTTCTGTTCACTTCCAGTGCAACAGTCAGAGCTCTACCCTGTGGACATTACATGCATTCAGCTTGCTTTCAGGCATACACGTGTAGCCATTATACCTGTCCAATTTGCAGCAAGTCTTTAGGAGACATGGCGGTTTATTTCGGCATGCTTGATGCTCTGTTGGCTGCTGAAGAGCTTCCACACGAGTACAGGGATCGTTGTCAGCAGGATATATTGTGCAACGACTGTGATAGGAAGGGGACGTCTCGATTTCATTGGTTATATCACAAGTGCGGACTTTGCGGTTCATACAACACCCGGGTCATCAAAAATGAGACTATAAATGTAGATTGCTCAGAGTCAAATCACTGA 3738 42.05 MATPFTGLQLRDGGGVAVLSNSVNKVDASSSPSPPPSSSNGGCLRSSEPKSPILIFLFFHKAIRYELDALHMFAMALATGQRTDIQPLIKRYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSSTQDDECLSRELASCTRALRTSVSQHMAKEEEQVFPLLMEKFSLDEQASLVWQLFCSIPVNMMAEFLPWLASSISPDESQDLRKCLSKIVPKEKLLQQVVFTWMEGRNGAIGAESPIDDSFGGCCVDTRICISSQETEKVKRACVEMTTGKRKHIDFSDDTTDVMETHPINEILLWHNAIKKELTEIAEEARKIQLSGNFDNLSAFNERLHFIAEVCVFHSIAEDKVIFPAVDGELSFLQEHAEEESQFNEFRSLMEEGIQSDGSVSNSTAEFYSKLCSLADQIIDTIQRHFNNEELQVLPLARKHFSLKQQRELLYRSLCMMPLKLIERVLPWLIGSLSEDEAGNLLKNIQLAAPTSDTALVTLFSGWACKARNRGLCLSSRGTGSCPVKRLIDIEENVVPSFCSHASALPPRDSKSSSKENNFERPAKRNVCVSCKNCDASSFLEAANFQHPCCGDESCCVPGLGVKSNNLGLSSLFATKSLCSLSPSSGAPSLNSSLFSWETDINFSDIEASGRPIDTIFKFHKAIRKDLEYLDVESGKLNQCDETFLRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHRQEEKLFEDIASVLLELSHLHGNSSLDIDSSGNQLGKHVELATKLQGMCKSIRVSLDQHIFREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTEDEQNIMMDTWKQAAKNTMFNEWLNECWKGIEVSTLRTGTLEANIAQKGIEIREGLDQCDQMFKPGWKDIFRMNQNEIESEIRKVYQDLTLDPRRKAYLVQNLMTSRWIATQQKLTEITVASSNIEDVAGRSPSYCDPNKSKFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCLTIQAVGPTCSTPSCNGFSMAKYYCNICRFFDDERTVYHCPFCNLCRLGRGLGHDFFHCMTCNCCLGIKIVNHKCLEKSLETNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPHEYRDRCQQDILCNDCDRKGTSRFHWLYHKCGLCGSYNTRVIKNETINVDCSESNH 1245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15895945 15904982 - Bpe021883.1 Bpe07g01039 106808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01039 1245 CDD Hr-like 317 446 - -
Bpe07g01039 1245 PANTHER CHY ZINC FINGER PROTEIN 35 1240 - -
Bpe07g01039 1245 Pfam Ring finger domain 1123 1165 IPR001841 -
Bpe07g01039 1245 ProSiteProfiles Zinc finger CTCHY-type profile. 1060 1123 IPR017921 -
Bpe07g01039 1245 Gene3D nmb1532 protein domain like 658 879 - -
Bpe07g01039 1245 CDD Hr-like 55 181 - -
Bpe07g01039 1245 ProSiteProfiles Zinc finger CHY-type profile. 988 1057 IPR008913 GO:0008270
Bpe07g01039 1245 SUPERFAMILY Zinc hairpin stack 1061 1117 IPR037275 -
Bpe07g01039 1245 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1117 1168 IPR013083 -
Bpe07g01039 1245 Gene3D nmb1532 protein domain like 318 464 - -
Bpe07g01039 1245 Gene3D nmb1532 protein domain like 51 201 - -
Bpe07g01039 1245 Gene3D - 1196 1241 - -
Bpe07g01039 1245 Pfam Zinc-ribbon 1171 1229 IPR039512 -
Bpe07g01039 1245 Pfam Hemerythrin HHE cation binding domain 313 448 IPR012312 -
Bpe07g01039 1245 Pfam Hemerythrin HHE cation binding domain 663 812 IPR012312 -
Bpe07g01039 1245 Pfam Hemerythrin HHE cation binding domain 57 183 IPR012312 -
Bpe07g01039 1245 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 35 1240 - -
Bpe07g01039 1245 SUPERFAMILY CHY zinc finger-like 990 1051 IPR037274 GO:0008270
Bpe07g01039 1245 Pfam CHY zinc finger 995 1070 IPR008913 GO:0008270
Bpe07g01039 1245 SUPERFAMILY RING/U-box 1123 1169 - -
Bpe07g01039 1245 SMART ring_2 1124 1165 IPR001841 -
Bpe07g01039 1245 MobiDBLite consensus disorder prediction 25 45 - -
Bpe07g01039 1245 CDD RING-H2_Pirh2 1123 1166 - -
Bpe07g01039 1245 ProSiteProfiles Zinc finger RING-type profile. 1124 1166 IPR001841 -
Bpe07g01039 1245 CDD Hr-like 665 811 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g01039 Bpe12g00694 CCT
Bpe07g01039 Bpe12g00694 ECH
Bpe07g01039 Bpe15g00528 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00800 Bpe-Chr7:14365675 Bpe07g01039 Bpe-Chr7:15895945 1.68E-14 dispersed
Bpe07g01039 Bpe-Chr7:15895945 Bpe12g00694 Bpe-Chr12:12513117 0 dispersed
Bpe07g01039 Bpe-Chr7:15895945 Bpe05g00846 Bpe-Chr5:21662122 2.36E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01039 K16276 - mnt:21402857 1927.91