Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01044 ATGAGTGGAAGCACAAATTCGGCCACTGGAAATGAGAGCTTGAAAGCTGAATGCAACTCTAAGCGGGAGGCTGAGTTTGAAGGTGCTGATGAGATCGCGAAGAAGCTGAAAACTGAAGCTTCTTCGGAATCTACTGACAGAAACCATGAAGTTGAAAACGGCCGTCTTGGTGGTGATGTGCGCGAGCAAAATAATGGTTCTGCGATTGTTAAGATGAGTAAAGAAGTGATTTTTGAGATTGAAGCTGATGTGGCTGAGGATAAAGGATCTAGGCATGCTATGGAGGATGCTAGCGTCGTGCTTTTGGATGCAAGCTTGGATTTCCCTGGAAAATTGAGATGTTGTCATTTTGCTGTCTACGACGGACATGGAGGTCGATTAGCGGCAGAGCACGCCCAAAAGTATTTACATTTGAATGTGCTCTCAGCCGGCTTACCACGTGAGTTGGTGGATGTAAAAGCAGCCAAAAGAGCAATTTTAGATGGTTTTCGAAAGGCTGATGAGTCACTTCTTCTAGAAAGTACTGCTGGGGGATGGCAAGATGGCGCTACTGCTGTGTGTGTCTGGATTTTAGGCCAAAAAGTTTTTGTTGCTAATGTTGGTGATGCAAAAGCTGTGGTTGCACGATCTCCTGCGGGTACTAATTTGCAAAATCATCCTGAATTTGAAAGTTCCTTAAAGGCTATAGTTTTGACCAGGGAACACAAAGCAATATATCCACAGGAGCGAGCTCGGATTGAGAAGGCTGGTGGTATAGTTAGCTCTAATGGGAGAATACAGGGGCGCCTGGAAGTATCTCGGGCATTTGGAGATCGCCAATTCAAGAAGGTAGGTGTCGTTGCAACCCCAGATATACATTCATTTGACTTAACTGAAAGGGACCATTTTATGATTATTGGTTGTGATGGCCTCTGGGGGGTATTTGGGCCTAATGATGCTGTTGATTTTGTTTGGAAATTGTTGAAGGCAAGACAGGATGAAGGAGCTGTAACAGCTGTGAGTCGCCATCTTGTAAGAGAAGCCGTTCGAGAGCGACGCTGTAAAGATAACTGTACTGCAATTGTCATTGTTTTCCGGCATAAGTCAGACTAG 1092 44.96 MSGSTNSATGNESLKAECNSKREAEFEGADEIAKKLKTEASSESTDRNHEVENGRLGGDVREQNNGSAIVKMSKEVIFEIEADVAEDKGSRHAMEDASVVLLDASLDFPGKLRCCHFAVYDGHGGRLAAEHAQKYLHLNVLSAGLPRELVDVKAAKRAILDGFRKADESLLLESTAGGWQDGATAVCVWILGQKVFVANVGDAKAVVARSPAGTNLQNHPEFESSLKAIVLTREHKAIYPQERARIEKAGGIVSSNGRIQGRLEVSRAFGDRQFKKVGVVATPDIHSFDLTERDHFMIIGCDGLWGVFGPNDAVDFVWKLLKARQDEGAVTAVSRHLVREAVRERRCKDNCTAIVIVFRHKSD 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 15949670 15953610 - Bpe021887.1 Bpe07g01044 106813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01044 363 CDD PP2Cc 84 358 IPR001932 -
Bpe07g01044 363 MobiDBLite consensus disorder prediction 1 15 - -
Bpe07g01044 363 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 22 355 - -
Bpe07g01044 363 MobiDBLite consensus disorder prediction 1 65 - -
Bpe07g01044 363 Gene3D - 79 363 IPR036457 -
Bpe07g01044 363 ProSiteProfiles PPM-type phosphatase domain profile. 81 358 IPR001932 -
Bpe07g01044 363 Pfam Protein phosphatase 2C 85 346 IPR001932 -
Bpe07g01044 363 MobiDBLite consensus disorder prediction 16 57 - -
Bpe07g01044 363 PANTHER PROTEIN PHOSPHATASE 2C 22 355 IPR015655 GO:0004722|GO:0006470
Bpe07g01044 363 SUPERFAMILY PP2C-like 75 359 IPR036457 -
Bpe07g01044 363 SMART PP2C_4 75 356 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01044 Bpe-Chr7:15949670 Bpe02g00303 Bpe-Chr2:1997928 3.32E-32 dispersed
Bpe07g01044 Bpe-Chr7:15949670 Bpe04g00287 Bpe-Chr4:1838362 6.16E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01044 K17500 - vvi:100257757 479.944