Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01071 ATGGAGTACGGTAGTGGAGGCGGTGGCTCCGGCGGGGATGATGATTTGTTTTCCGACCAAAAGAAGAGGAAGAAACGCTACCATCGTCACACTGCTCATCAGATTCAGAAGCTCGAAGCAATGTTCACCGAGTGCCCTCACCCAGATGAAAAACAGAGAATGCATTTGAGCAGAGAACTGGGTTTGGCGCCTCTGCAAATCAAATTCTGGTTCCAAAACAGAAGAACCCAGATGAAGACCCAACACGAGAGAGCAGACAACTATTCTCTTCGCGCAGAGAACGACAAGATCAGATTTGAAAACATTGCAATAAGAGAAGCACTCAAAAATTTGATTTGTCCATCTTGTGTTGGACCTCCCCTTACTGAAGATTCCTGTTTCGATGAGCAGAAGCTTCGCATGGAGAATTCCCAAGTTTCCAGCATTGTAGCTAAATACACAGGGAGGCCAATTTCCCAACTCCCACCCGTTCATCCTATCCATATTTCCTCTCTTGAGCTATCAATGGGTAATTTTGGAACTTCTGGTCCTTCTCTGGATCTTGATCTTCTCCCAGGAACCTCTTCGACTGGTGGGTCTTTACCTTTCCAGTCAATCGGCTTATCCGATGAGGATAAATCCATAATGGCTGATATAGCTGCACATTCAATGGAAGAACTAATCGGGCTTGCGCAATCAAATGAACCACTATGGATGAAATCCCCCACACATGGAAAAGACGTTCTTAATCTCCAAAATTACGACCGGATTTTTCCCAAGCCTACAGTCCGATTGAAAAATCCCCATCTTCGAATTGAAGCATCTAGAGATTCTGGTGTTGTTATGATGAATTCCTTAACATTGGTGGACATGTTTATGGACTCTAACAAGACAATGGAGCTATTTCCCGGCATTATTTCATCGGCAAGAACGATGGAAGTGATATCGTCTGGATTATTGGGTAGCCATAGTGGAACTTTACTTCTGATGCATGAAGAATTACAGGTCCTTTCTCCATTAGTACCGACTAGAGAGTTCTATTTCTTAAGATATTGCCAGCAAATCAATCAGGAGTTGTGGGCAATATGCAATGTTTCGTACGATTTTCCAGAGGAAAATCGATTCGGTTCCCAGATTCAATCTCGTCGGCTTCCATCAGGCTGCCTAATTCAAGACATGCCAAATGGTCATTCTAAGGTTATTTGGGTTGAACATGTGGAAATCGAAGACAAAAACCTTCCTCATCGACTCTATCAAGACCTGTTTTATGGTGGCATTGCATTCGGTGCTGAAAGATGGGTTGCCATTCTCCAAAGAATGTGCGAAAGATTTGCCTCTTCAATGGCTGCAGCCAATTCTGCCCGCGAACTCAAAGGAGTAATTTTTTCGCCAGACGGCAAGAGGAGCACGATGAAACTGGCCCAGCAAATGATCAACAACTTTTGTGCAAGTATCAGCACATCAAACGGTCACCGATGGACGAATCTTTCCGGACAGAACGAGGTCGGAGTTAGAGTCACTGTCCATAAAAGCAATAATCCTGGCCAACCCAATGGCGTGGTTCTTAGTGCAGCCACCACAATTCGGCTCCCTGTTTCCCCGCAGGACGTCTTCAATTTTTTCAGAGACGAACGAACTCGATCTCAGTGGGATGTTCTTTCTGATGGAAATGTAATTCAAGAGGTTGCTCATATCGCAAATGGATCACATCCAGGAAACTGCATATCGATTCTTCGAGCCCTCAACACCAGCCAGAACAACATGTTGATACTCCAAGAAAGTTGCACAGATTCATCTGGGTCGATGGTTGTCTACTGCCCGGTCGATCTTCCGGGCATTAACATCGCAATGAGCGGAGAAGACCCTTCACATATTCCACTGCTACCGTCCGGTTTTGTCATATCGCCAGATGGCCGAGCCAAACAATTGCCTTCGACGAGCTCTGGCCAATCGGGTGGATCTTTGATTACAGTAGCATTTCAGATACTAATGAGCAGCCTGCCATCAGGTAAGCTAAACTTAGAGTCAGTGACAACTGTTAATAACCTTATTGGAACCACTGTCCAGCAAATTAAGACAGCTCTGAACTGTCCCAGCACT 2079 45.12 MEYGSGGGGSGGDDDLFSDQKKRKKRYHRHTAHQIQKLEAMFTECPHPDEKQRMHLSRELGLAPLQIKFWFQNRRTQMKTQHERADNYSLRAENDKIRFENIAIREALKNLICPSCVGPPLTEDSCFDEQKLRMENSQVSSIVAKYTGRPISQLPPVHPIHISSLELSMGNFGTSGPSLDLDLLPGTSSTGGSLPFQSIGLSDEDKSIMADIAAHSMEELIGLAQSNEPLWMKSPTHGKDVLNLQNYDRIFPKPTVRLKNPHLRIEASRDSGVVMMNSLTLVDMFMDSNKTMELFPGIISSARTMEVISSGLLGSHSGTLLLMHEELQVLSPLVPTREFYFLRYCQQINQELWAICNVSYDFPEENRFGSQIQSRRLPSGCLIQDMPNGHSKVIWVEHVEIEDKNLPHRLYQDLFYGGIAFGAERWVAILQRMCERFASSMAAANSARELKGVIFSPDGKRSTMKLAQQMINNFCASISTSNGHRWTNLSGQNEVGVRVTVHKSNNPGQPNGVVLSAATTIRLPVSPQDVFNFFRDERTRSQWDVLSDGNVIQEVAHIANGSHPGNCISILRALNTSQNNMLILQESCTDSSGSMVVYCPVDLPGINIAMSGEDPSHIPLLPSGFVISPDGRAKQLPSTSSGQSGGSLITVAFQILMSSLPSGKLNLESVTTVNNLIGTTVQQIKTALNCPST 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16117872 16120757 - Bpe026089 Bpe07g01071 106840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01071 693 Gene3D - 14 96 - -
Bpe07g01071 693 ProSiteProfiles START domain profile. 202 439 IPR002913 GO:0008289
Bpe07g01071 693 SUPERFAMILY Bet v1-like 457 685 - -
Bpe07g01071 693 Gene3D - 466 684 IPR023393 -
Bpe07g01071 693 SUPERFAMILY Homeodomain-like 10 81 IPR009057 -
Bpe07g01071 693 ProSiteProfiles 'Homeobox' domain profile. 21 81 IPR001356 GO:0003677
Bpe07g01071 693 Gene3D - 212 419 IPR023393 -
Bpe07g01071 693 SUPERFAMILY Bet v1-like 203 438 - -
Bpe07g01071 693 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 5 691 - -
Bpe07g01071 693 Pfam START domain 212 436 IPR002913 GO:0008289
Bpe07g01071 693 MobiDBLite consensus disorder prediction 1 32 - -
Bpe07g01071 693 CDD START_ArGLABRA2_like 206 435 - -
Bpe07g01071 693 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 691 IPR042160 -
Bpe07g01071 693 SMART START_1 211 436 IPR002913 GO:0008289
Bpe07g01071 693 CDD homeodomain 23 82 IPR001356 GO:0003677
Bpe07g01071 693 ProSitePatterns 'Homeobox' domain signature. 56 79 IPR017970 GO:0000981|GO:0006355
Bpe07g01071 693 SMART HOX_1 22 85 IPR001356 GO:0003677
Bpe07g01071 693 Pfam Homeodomain 24 79 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01071 Bpe-Chr7:16117872 Bpe14g00705 Bpe-Chr14:5506370 0 dispersed
Bpe02g01344 Bpe-Chr2:17076040 Bpe07g01071 Bpe-Chr7:16117872 6.55E-158 transposed
Bpe12g00639 Bpe-Chr12:12017415 Bpe07g01071 Bpe-Chr7:16117872 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21691 PF01852 START 7.50E-45 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01071 K09338 - mnt:21407821 1048.5