Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01072 ATGACTAAAACACTGGTGGTTTTCAGAAGCATGACAGATATTATTTACCTTCTCCACATTCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAATCTAGAGTGGTTGGAGCAGGAGAATTAGTGGACCATCCAAAGAAAATTGCTCTGAATTACCTTAAGAGTTTCTTTTTTGTTGACTTATTTGTAGCATTGCCACTTCCTCAAGTTATAGTTCTATTTATACTACCAAAATCGCTAGGATCGTCTGGAGCAAACTACGCAAAAAATCTTTTACGTGCAGCAGTTCTTGTGCAATACATACCCAGATTGTTTAGATTTTTGCCACTTCTGGTTGGTCAGTCTCCAAATGGCTTCATATTTGAGACTGCATGGGCCAATTTTGTTCTCAATCTTTTCACTTTCATGTTGTCTGGCCACGTCATCGGCTCTTTCTGGTACCTCTTTGGATTACAGAGGGTCAACCAATGTCTTCGAATTGCCTGCCAAAACTCTGGAATTCAATCGTGCCCAACATTTATAGATTGTGGACATGGGGATGATGTTAACAGATTTGATCTTTATCCAACTTGGAACAGCTGGAAAAGCAATGATAATGCTACCTCTTGCTTTACTTCAAATGGATATCCTTACGGAATTTACATTCAAGCCGTCAGTCTAGTCTCGCAAAGTAGTACGATCCGAAGATACGTTTACTCCCTTTTTTGGGGGTTTCAGCAAATCAGTACTCTTGCTGGGAATCAAGTTCCAAGCTTTTTTGTGTGGGAAGTTCTTTTCACTATGGCCATTATTGGACTTGGTCTTTTGTTATTTGCTCTACTTATTGGAAATATGCAAAACTTCCTCCAGGCTCTCGGTCAAAGGAGGTTACAAATGTCGTTAAGACGGCGTGACGTCGAGCTGTGGATGGCACATCGGCGTTTGCCCGTCGAACTTAAAAAGCAAGTACGGGAAGCCGAAAGGTACAGTTGGGCTGCAACAAGAGGCGTAAACGAAGAAACACTCTTGGTGAATTTGCCCGAAGATCTTCAAAGAGATATACGACGTCATCTCTTCAAGTTCTTAAAAAAAGTTAGGATTTTTTCGTTGATGGATGAACCGATTTTAGATTTGATACGAGAAAAACTGAGACAAAGAACGTATATACAAGGAAGTGAAGTTTTTTTCCAAGGCGGCCTTGTTGAGAAGATGGTTTTCATCGTTAGAGGAAAAATGGAGAGTTTGGGGGCCGACGGAATTGTGGTCCCGTTGTCAGAAGGAGACGTTTGTGGGGAAGAACTTCTAGCATGGTGTCTTGAACATTCTTCCGTGAATAGAGACGGAAAAAGAACTAGCGTCGCCGGACAGAGATTGGTCAGCACTCGAACGGTGAGTTGCTTGACGAATGTGGAAGCATTTTCCCTCCACGTTGCCGATCTTGAACAAGTGACGAGTCTTTTTGCAAGATTCTTGCGAAATCATCGTGTTCAAGGAGCCATACGATATGAATCTCCCTACTGGAGAAGCTTAGCAGCAAATCGGATTCAAGTCGCATGGAGATACCGGAAAAAACGTAGAATTCGAGCCGACTCGGGTTGA 1578 42.4 MTKTLVVFRSMTDIIYLLHILLQFRLAYVAPESRVVGAGELVDHPKKIALNYLKSFFFVDLFVALPLPQVIVLFILPKSLGSSGANYAKNLLRAAVLVQYIPRLFRFLPLLVGQSPNGFIFETAWANFVLNLFTFMLSGHVIGSFWYLFGLQRVNQCLRIACQNSGIQSCPTFIDCGHGDDVNRFDLYPTWNSWKSNDNATSCFTSNGYPYGIYIQAVSLVSQSSTIRRYVYSLFWGFQQISTLAGNQVPSFFVWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGQRRLQMSLRRRDVELWMAHRRLPVELKKQVREAERYSWAATRGVNEETLLVNLPEDLQRDIRRHLFKFLKKVRIFSLMDEPILDLIREKLRQRTYIQGSEVFFQGGLVEKMVFIVRGKMESLGADGIVVPLSEGDVCGEELLAWCLEHSSVNRDGKRTSVAGQRLVSTRTVSCLTNVEAFSLHVADLEQVTSLFARFLRNHRVQGAIRYESPYWRSLAANRIQVAWRYRKKRRIRADSG 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16122315 16126069 - Bpe021914.1 Bpe07g01072 106841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01072 525 Gene3D - 1 281 - -
Bpe07g01072 525 SMART cnmp_10 360 495 IPR000595 -
Bpe07g01072 525 Gene3D Helix hairpin bin 282 352 - -
Bpe07g01072 525 SUPERFAMILY Voltage-gated potassium channels 3 283 - -
Bpe07g01072 525 CDD CAP_ED 360 476 IPR000595 -
Bpe07g01072 525 Pfam Ion transport protein 3 288 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe07g01072 525 Gene3D Jelly Rolls 358 482 IPR014710 -
Bpe07g01072 525 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 523 - -
Bpe07g01072 525 SUPERFAMILY cAMP-binding domain-like 287 484 IPR018490 -
Bpe07g01072 525 ProSiteProfiles cAMP/cGMP binding motif profile. 360 428 IPR000595 -
Bpe07g01072 525 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 1 523 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g01072 Bpe12g00588 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g01072 Bpe-Chr7:16122315 Bpe01g00671 Bpe-Chr1:4729042 3.76E-126 dispersed
Bpe12g00640 Bpe-Chr12:12029994 Bpe07g01072 Bpe-Chr7:16122315 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01072 K05391 - jre:109012085 824.698