Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe07g01075 ATGGTGCTCACGACGACCTCGTCTTACTCTGATGATAGTATGAACTCCACCTTTGCCTCCAGATACGTCAGAATTCCTCTCCCCAAATTCAGGATGGGGGAAAATCAAATACCAAAAGAAGCGGCATATCAAATAATAAACGACGAGTTGATGTTGGATGGAGCGCCGAGATTAAACCTCGCTTCTTTTGTGACCACTTGGATGGAGCCAGAGTGCGACAAGCTGATCATGGCTTCAATGAACAAGAACTACGTTGACATGGATGAGTACCCTGTCACCACTGAACTCCAGAATCGTTGCGTGAATATTATTGCCAACCTATTTAATGCACCTGTTAAAGAAGATGAAGCTGCAGTCGGCGTGGGTACTGTAGGTTCATCAGAGGCAATAATGCTGGCTGGCCTTGCTTTTAAAAGGAAATGGCAGCAAAAGAGAAAATCAGAAGGCCGACCATTTGATAAACCCAACATAGTTACTGGAGCAAACGTACAGGTATGCTGGGAGAAGTTTGCAAGGTACTTCGAGGTGGAGCTGAAGGAGGTCAAACTGTCTGAAGGATTTTACGTTATGGACCCTGTAAAAGCAGTTGAAATGGTGGATGAAAACACCATCTGCGTTGCAGCTATTCTGGGCTCGACACTGACAGGAGAGTTTGAAGACGTTAAACTTCTTAACGAGCTTCTCACTATGAAGAACAGTGAGACAGGATGGGACACCCCAATTCACGTTGATGCTGCTAGTGGAGGATTTATAGCTCCATTTCTTTACCCTGAGCTCGAGTGGGATTTTAGATTGCCATTAGTGAAGAGTATCAATGTCAGTGGCCACAAGTATGGCCTTGTCTACCCTGGTGTTGGTTGGGTTGTGTGGAGAAGTAAAGAAGACTTGCCAGAAGAACTGATATTTCATATTAACTATCTTGGATCTGATCAACCCACTTTCACCCTCAACTTCTCCAAAGGCTCTAGCCAGATTATTGCTCAGTATTATCAGTTCATAAGGCTCGGATTTGAGGGTTACAAGAACATTATGAAGAACTGCATAGAAAATTCAAGAGTTTTGAAAGAAGGAATAGAAAAAATGGGAAAATTCACAATTCTCTCCAAAGATGTTGGAGTTCCTCTTGTCGCTTTCTCTCTGAAAGACAGTAAAAACTACACAGTATTTGACATAGCAGAGAGTTTGAGAAGGTACGGGTGGATTGTACCGGCATATACGATGCCACCAAATGCTGAGAACATAGCTGTTCTAAGAGTGGTGATAAGGGAGGACTTCAGCTGTGGCTTGGCGGATAGGCTCATATCAGACATTGAGAAAGTATTGAAGGAACTGGGAGGGCCGTCTAGCCGGATGTCTATAAAATCAGCTCTTGTTGAAGCCAATGTTGAAGAAGCAGAGAATGGAGAAGAAGGTGGTTCAGAGACCGTTAAAAAGAGTGTGAAAGAGATTGAGAAGGAGGTTTTTACTTACTGGAAGAGGCTTGTGGATGGGAAGAGAACTGGGGTCTGCTAA 1512 43.78 MVLTTTSSYSDDSMNSTFASRYVRIPLPKFRMGENQIPKEAAYQIINDELMLDGAPRLNLASFVTTWMEPECDKLIMASMNKNYVDMDEYPVTTELQNRCVNIIANLFNAPVKEDEAAVGVGTVGSSEAIMLAGLAFKRKWQQKRKSEGRPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGFYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLTMKNSETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKEDLPEELIFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMKNCIENSRVLKEGIEKMGKFTILSKDVGVPLVAFSLKDSKNYTVFDIAESLRRYGWIVPAYTMPPNAENIAVLRVVIREDFSCGLADRLISDIEKVLKELGGPSSRMSIKSALVEANVEEAENGEEGGSETVKKSVKEIEKEVFTYWKRLVDGKRTGVC 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16136351 16140104 + Bpe021916.1 Bpe07g01075 106844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe07g01075 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bpe07g01075 503 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bpe07g01075 503 Gene3D - 66 360 IPR015421 GO:0003824
Bpe07g01075 503 CDD DOPA_deC_like 59 439 - -
Bpe07g01075 503 Gene3D - 1 65 - -
Bpe07g01075 503 Pfam Pyridoxal-dependent decarboxylase conserved domain 38 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bpe07g01075 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 - -
Bpe07g01075 503 Gene3D - 361 446 - -
Bpe07g01075 503 SUPERFAMILY PLP-dependent transferases 12 444 IPR015424 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00950 Bpe-Chr5:22429805 Bpe07g01075 Bpe-Chr7:16136351 3.46E-16 dispersed
Bpe07g01075 Bpe-Chr7:16136351 Bpe09g00716 Bpe-Chr9:15744910 0 dispersed
Bpe07g01075 Bpe-Chr7:16136351 Bpe02g01352 Bpe-Chr2:17143152 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe07g01075 K01580 - qsu:112038575 820.461