Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00012 ATGGACAGAGCATGGGGTCTTACCCTTCGTGATTCAGAATCCATCTCCCCCTTTCTCAGCAAACCTCCTTCTTCTCCTCCTTCCTTTTCGCACCCTATCCCTAACTCCCCTTTCATGTTCGCCGGAATTCAATTCCCACTGAAACTCGGCCGCCTTGAAGAAGAACCGCACCCGCCCTCACGTCTGAATCCCATGCTATTAGACGAGGTTGATTTCTTTTCTGATAAGAAAACAGTGGTTGAAGACCCCCCAGAACTTGATAACTATTGTAAATCCGCCAAAGTTATAGTCAAAAGAGAAAAGGACAACTCCGACAGACCGCCGTCCGACTCGGATGTAAATACTGGATTACACCTCCTAATTGCCAACCCGGGAAGCGATCAGTCTACGGTGGATGATGGGATCTCATCAGAGGGCTATCACCGTCATAAGCGAGCTAAAAATGAGCTGGTTCAATTGCGAGTGGAACTTGAACGGATGAATTCAGAGAATCAAAAGTTAAGAGAAATGCTCACCCAGGTTAGCAACAACTACAGCGCTCTACAGATGCATCTTTTGACTGTAATGCAACAGCAACATATCGACCTCCCTTCTGAAAATGGGAAACGACATCGAAATCTGGTAAAAATATTAATTTACTCCTCAAACTATACCGGTTTCAAATTTTTGAGAAAGCTAACATCTTGTTGGTGTCAGATTGTAGAAGGAGAATCGAGCGAGATAAAAGAAGTTCCGGTGGGAAGAGCTGTGGTGCAAAGGCAGTTTATGGATCTTGGACCCAGTGCGGCAGATGACCAAGTTTCGCAGTCTTTATCTGATGAAAGAACGGTTTCTGGGTCTTCTCTGAACCAAGCAGAAGTTGGTGATTTAAAGAGAAGCATAAATGAGAGTGGTCCAGAACAGTCTCATGCGAAGGCATGGAAAAGAAAGGAAGGCAACCCTGATTCAAATAGTTACGGTCCTAATAAGATGAACTCGGCCAAACCTCTTGACAACCCGACGACTGAGGCCACCATGAGGAAAGCCCGAGTCTCTGTTCGAGCTCGATCTGAAGCGCCCATGATAAACGACGGATGCCAATGGAGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTCGGGCTTATTATAGATGCACTATGGCAGTCGGATGTCCAGTTCGAAAACAAGCTCAACGCTGTGCCGAAGATCGGACAATTTTGATAACCACGTACGAAGGAAACCATAATCACCCTCTTCCACCAGCTGCTATGGCTATGGCTTCCACCACAACTGCGGCTGCTACGATGCTACTCTCTGGGTCCATGCCAAGTGCAGATGGCTTAATGAACCAAAATTTACTCGCAAGGGCTATTCTTCCTTACTCATCAAGCATGGCTACAATTTCAGCTTCAGCTCCATTTCCAACTGTTACCTTAGACCTCACTCACTCACCAAACAACCCAATCCAAAGGCCTACCACCACCCAGCTCCACCTCCCATTTCCGGGACAACCTCATCAAATCCCTCCTCCGGTTTTCAGTCAACCGCTGTACAATCAATCTCAGCTCTCCGGTCTTCAGCTCTCCGGCCATGAAGTTGGTTCTTCTCGGTTATCCCACCAAACTCTACCGCCTCTATTGCCCCAGCCTCTTCTAGCTCCTTCATATTCCGACTCATTGAGTGCTGCCACAGCTGCCATTGCGGCTGATCCAAACTTCACCGCGGCCCTTGCCGCGGCCGTAAGATCCATCATTGGCGGCTCTCAGTCAAGCAATGGGCACACAAATATTGCTTCAAGCAATAGTAACAACAGCAGCCAGAAAGTTAATAGCCACGCAGAAATGTAG 1836 47.6 MDRAWGLTLRDSESISPFLSKPPSSPPSFSHPIPNSPFMFAGIQFPLKLGRLEEEPHPPSRLNPMLLDEVDFFSDKKTVVEDPPELDNYCKSAKVIVKREKDNSDRPPSDSDVNTGLHLLIANPGSDQSTVDDGISSEGYHRHKRAKNELVQLRVELERMNSENQKLREMLTQVSNNYSALQMHLLTVMQQQHIDLPSENGKRHRNLVKILIYSSNYTGFKFLRKLTSCWCQIVEGESSEIKEVPVGRAVVQRQFMDLGPSAADDQVSQSLSDERTVSGSSLNQAEVGDLKRSINESGPEQSHAKAWKRKEGNPDSNSYGPNKMNSAKPLDNPTTEATMRKARVSVRARSEAPMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQAQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTTAAATMLLSGSMPSADGLMNQNLLARAILPYSSSMATISASAPFPTVTLDLTHSPNNPIQRPTTTQLHLPFPGQPHQIPPPVFSQPLYNQSQLSGLQLSGHEVGSSRLSHQTLPPLLPQPLLAPSYSDSLSAATAAIAADPNFTAALAAAVRSIIGGSQSSNGHTNIASSNSNNSSQKVNSHAEM 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 79830 82017 - Bpe022113.1 Bpe08g00012 106888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00012 611 MobiDBLite consensus disorder prediction 263 295 - -
Bpe08g00012 611 PANTHER WRKY TRANSCRIPTION FACTOR 31-RELATED 67 600 - -
Bpe08g00012 611 SUPERFAMILY WRKY DNA-binding domain 348 416 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe08g00012 611 Gene3D WRKY domain 340 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe08g00012 611 Pfam WRKY DNA -binding domain 356 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00012 611 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 67 600 IPR044810 GO:0003700
Bpe08g00012 611 ProSiteProfiles WRKY domain profile. 350 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00012 611 MobiDBLite consensus disorder prediction 261 337 - -
Bpe08g00012 611 MobiDBLite consensus disorder prediction 488 507 - -
Bpe08g00012 611 Coils Coil 143 177 - -
Bpe08g00012 611 MobiDBLite consensus disorder prediction 587 611 - -
Bpe08g00012 611 MobiDBLite consensus disorder prediction 315 333 - -
Bpe08g00012 611 SMART WRKY_cls 355 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe08g00012 611 MobiDBLite consensus disorder prediction 296 312 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00784 Bpe-Chr3:27807468 Bpe08g00012 Bpe-Chr8:79830 9.70E-83 dispersed
Bpe07g00621 Bpe-Chr7:12935671 Bpe08g00012 Bpe-Chr8:79830 2.14E-111 dispersed
Bpe08g00012 Bpe-Chr8:79830 Bpe15g00723 Bpe-Chr15:17745681 5.50E-164 dispersed
Bpe01g00023 Bpe-Chr1:211497 Bpe08g00012 Bpe-Chr8:79830 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21696 PF03106 WRKY 7.70E-23 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00012 - - tcc:18597191 538.88