Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00028 ATGAAAACATCTCAGAAGCACCCAAATTCAGCCAACATCGAAGGATTGCACCATCAGCCTATGCAAGACATAAAGTCCTATTATTTGTCTCATTTCCAAGTGTTAGGAAACACTTCCCGTTCTAACCTTGGCAGCCGAGGGACGATAGTATCCTTTGACTCTTGCATGGAACAGTTTTTTACTCTCGAATCATCCGCAGCCACCAATGTCGTTGGTCCTTGTGATTCCCCCAGTGTCTTTTCAAGCAAAAGCTCCTTTTCCCCACAAGTTTCTCATTCAAGTTCCTCAGATCCACATCATTCCCATGACAACTTATCCGGATCGCCAGCCAGTGGGTGCTCTGTAAACACAGATGACGATAAGTTAAAGCACAAGCTGAGGGAACTGGAGCTTTCATTGCTGGAACCAGAATCAGATATTGGTGACAGCTGCTACTGCTCTTTCAACGGTGGGACAAATCGAGCCACCTCTATGGCTACTTGGAAGAATCAAATGGCAGATGAAATTCCCAGATTGAACCTGAAAGAATTACTTATCGGCTGTGCACAATCCATACATGAGGCTGATTTATCGACAGCTATGCACTTTATGGAGGCGTTGGAGCAGATGGTGTCAGTATCTGGGGATCCATTGCAGAGATTGGGTGCTTATTTGTTGGAGGGGTTGAGAGCAAGGCTGGAAAGATCAGGAAGTTCAATCTACAAGGCTCTTAAGTGTGAGGAGCCGACAAGCTCGGAGTTAATGTCATATATGTCTATCATCTATGAAATCTGTCCCTACTGGAAGTTTGGTTACTCATCTGCAAATGTTTTCATTCAAGAAGCCATGGAAAATGAACCCAAAATCCACATCATAGATTTCCAAATTGCACAGGGCAGTCAGTGGATACCGCTCATCGAGGATCTTGCAAAACGAGACGGAAACTGTGGGCCGCCACTTATCCGTATAACTGGTGTAGACGATTCTCAATCAGCCCATGCTCGGGGAGGGGGACTTCACATCGTAGGGCAGAGGTTGTCACAAGTTGCACAATCGTGTAGAGTACGATTCGAGTTCCATGCTGTGGCTATGTCCGGAAGTGAGGTAGAATTGTGTGATCTTGGGGTACAACCTGGGGAGGCGGTTGCTGTTAACTTTCCTTACGTTTTACATCACATTCCCGATGAGAGTGTGAGCACTCAGAATCACAGAGACCGTTTGTTGAGGTTAGTGAAGAGTTTATTGCCAAAAGTCGTCACCATTATTGAGCAGGAATCGAACACGAACACTTCCCCGTTCCTTTCGAGATTCATCGAGACTTTAGATTATTACACAGCCATGTTCGAATCGATAGATGCAGCTCTGCCAAGAGATGACAAGCAGAGGATCAGGGCGGAGCAGCACTGCGTGGCGAGAGACATAGTGAACATGATAGCGTGCGAGGGGGCAGAACGGAAAGAACGGCATGAACTTCTCGGGAAATGGAGGTTGAGATTGATGATGGCTGGGTTCACACCTTATCCATTGAGTCCGGGGGTGGCAGATGCGGTGAGAATATTGTTGGAAGAGTACAGTCAGAATTACAGAGTGGAGGAGAGTAATGAAGCTCTGTATTTGAGGTGGATGAAGAGAGCCATGGTAACTTCCTCTGCGTGGAGG 1638 46.64 MKTSQKHPNSANIEGLHHQPMQDIKSYYLSHFQVLGNTSRSNLGSRGTIVSFDSCMEQFFTLESSAATNVVGPCDSPSVFSSKSSFSPQVSHSSSSDPHHSHDNLSGSPASGCSVNTDDDKLKHKLRELELSLLEPESDIGDSCYCSFNGGTNRATSMATWKNQMADEIPRLNLKELLIGCAQSIHEADLSTAMHFMEALEQMVSVSGDPLQRLGAYLLEGLRARLERSGSSIYKALKCEEPTSSELMSYMSIIYEICPYWKFGYSSANVFIQEAMENEPKIHIIDFQIAQGSQWIPLIEDLAKRDGNCGPPLIRITGVDDSQSAHARGGGLHIVGQRLSQVAQSCRVRFEFHAVAMSGSEVELCDLGVQPGEAVAVNFPYVLHHIPDESVSTQNHRDRLLRLVKSLLPKVVTIIEQESNTNTSPFLSRFIETLDYYTAMFESIDAALPRDDKQRIRAEQHCVARDIVNMIACEGAERKERHELLGKWRLRLMMAGFTPYPLSPGVADAVRILLEEYSQNYRVEESNEALYLRWMKRAMVTSSAWR 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 179378 181015 - Bpe026109 Bpe08g00028 106904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00028 546 MobiDBLite consensus disorder prediction 85 116 - -
Bpe08g00028 546 Pfam GRAS domain family 174 546 IPR005202 -
Bpe08g00028 546 ProSiteProfiles GRAS family profile. 165 546 IPR005202 -
Bpe08g00028 546 PANTHER SCARECROW-LIKE PROTEIN 13 18 545 IPR030005 -
Bpe08g00028 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 545 IPR005202 -
Bpe08g00028 546 MobiDBLite consensus disorder prediction 85 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00028 Bpe-Chr8:179378 Bpe14g00729 Bpe-Chr14:5656426 0 dispersed
Bpe01g00045 Bpe-Chr1:308954 Bpe08g00028 Bpe-Chr8:179378 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21699 PF03514 GRAS 9.20E-127 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00028 - - mcha:111005597 712.605