Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00045 ATGGATCTCCTCCTTCTGGAGAAGACCCTTCTGGGTCTCTTCGTTTCGATTGTTCTCGCCATCACCATTTCCAAATTCCGTGGCAAGCGATTCAAGCTCCCTCCCGGACCCATACCCGTGCCTGTTTTCGGAAACTGGCTCCAAGTCGGCGATGACCTTAATCACCGCAACTTGACGCAATTGGCCCAGAAATTCGGCGACGTATTCCTTCTCCGGATGGGCCAGCGTAACCTTGTCGTTGTTTCTTCGCCGGAGCTAGCTAAGGAGGTGTTACACACCCAGGGAGTCGAGTTTGGGTCCCGAACCCGCAACGTCGTGTTCGATATTTTCACCGGCAAGGGCCAGGACATGGTTTTTACAGTCTACGGCGAGCACTGGAGGAAAATGAGACGAATCATGACCGTCCCTTTCTTCACCAACAAGGTGGTCCAGCAGTATAGGTTCGGTTGGGAAGCCGAAGCGGCCAGCGTCGTGGAGGACGTGAAGAAGAATCCAGAGGCGTCACGAAACGGTATCGTCTTGAGAAGGAGGTTGCAGCTGATGATGTACAATAACATGTACAGAATCATGTTCGATCGGAGATTCGACAGCGAGGATGACCCCTTGTTCAACAAGCTCAAGGCCCTGAACGGAGAGAGAAGTAGATTGGCCCAGAGCTTCGATTACAACTACGGCGATTTCATTCCAATTCTGAGGCCGTTTTTGAAAGGCTACTTGAAGATCTGCAAGGAAGTGAAGGAGAGGAGAATTCAGCTCTTCAAGGACTACTTCGTCGACGAGAGAAAGAAGCTAGCGAGCACGAAGAGCACAACCAACGATGGGCTGAAATGTGCGATCGACCATATCTTAGACGCGCAGCAGAAGGGAGAAATCAACGAAGACAACGTTCTGTACATCGTCGAGAACATTAACGTCGCCGCGATTGAAACTACCTTATGGTCGATTGAATGGGGGATTGCCGAGCTTGTGAATCACCCTGAAATTCAAAGCAAACTAAGAAACGAGCTGGACACTGTTCTTGGCTATGGCGTCCAAGTCACCGAGCCTGATATGCCCAAGCTCCCATATCTTCAGGCAGTGATCAAGGAGACTCTCAGGCTAAGAATGGCAATTCCACTCCTCGTCCCGCACATGAATCTGCACGAAGCTAAGCTCGGCGGTTATGATATTCCGGCGGAGAGCAAGATTCTGGTCAATGCTTGGTGGCTGGCCAACAACCCTGCCCACTGGAAGAAGCCCGAGGAGTTCCGTCCTGAGAGATTCTTGGAGGAAGAGTCCAAAGTTGAGGCGAACGGGAATGATTTCAGGTACCTTCCGTTTGGCGTTGGAAGAAGGAGCTGCCCCGGAATCATTCTGGCCCTGCCAATCCTGGGAATTACCATCGGTCGGTTGGTTCAGAACTTTGAGCTCTTACCTCCTCCCGGACAGGACAAGCTTGATACGTCTGAGAAAGGCGGTCAGTTCAGTTTGCACATACTGAAGCATTCCACCATCGTCGCCAAGCCGAGGTCATTTTAG 1518 51.45 MDLLLLEKTLLGLFVSIVLAITISKFRGKRFKLPPGPIPVPVFGNWLQVGDDLNHRNLTQLAQKFGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWEAEAASVVEDVKKNPEASRNGIVLRRRLQLMMYNNMYRIMFDRRFDSEDDPLFNKLKALNGERSRLAQSFDYNYGDFIPILRPFLKGYLKICKEVKERRIQLFKDYFVDERKKLASTKSTTNDGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGYGVQVTEPDMPKLPYLQAVIKETLRLRMAIPLLVPHMNLHEAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQDKLDTSEKGGQFSLHILKHSTIVAKPRSF 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 240910 242909 + Bpe022143.1 Bpe08g00045 106921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00045 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Bpe08g00045 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Bpe08g00045 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 Gene3D Cytochrome P450 24 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe08g00045 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00045 Bpe-Chr8:240910 Bpe06g00335 Bpe-Chr6:14766283 7.52E-75 dispersed
Bpe08g00045 Bpe-Chr8:240910 Bpe03g01076 Bpe-Chr3:29957538 6.35E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00045 K00487 - cpap:110823746 945.651