Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00049 ATGGCCGCGGAGGCCACAGAGACGGCGACCAAGTTTCAAAGCCCGGACTTTCGACCAGTCCCTTCTCCTCCTGATTTCCATCCCGATGTTACGGTTTCGACCCACGATGGTATCCACTTCTGGGAATTCATGATTGCAGGTTCAATCGCTGGATCGGTCGAGCACATGGCTATGTTTCCTGTCGACACGGTCAAGACTCATATGCAAGCTCTTAGGTCATGTCCAATGAAATCGGTCGGTGTGCGACAAGCCCTCCGGTCAATTTTGAATTCCGAGGGACCAGCTGGGCTCTATCGCGGGATCGGGGCAATGGCTCTCGGCGCTGGACCAGCCCACGCAGTGTATTTTTCAGTATACGAAATTTGTAAGAAATTCTTCTCGGGAGGGAACGCCAATAATTCAGCTGCCCATGCTATTTCCGGCGTGTTTGCTACGGTTGCTAGTGATGCAGTCTTTACGCCGATGGATATGGTGAAGCAGAGATTGCAGTTGGGAAGTAGTCCCAACAATGGAGTTTGGGATTGTGTCAAGAGGGTTCTTCGGGAAGAAGGCTTTCGAGCATTTTATGCGTCCTATAAGACGACTGTGTTGATGAACGCCCCTTACACTGCTGTACATTTCACAACATACGAGGCTGCAAAGAGGGGTTTGACGGAAATTTCGCCGGAGAGTGTGAGTGATGAGCGGTGGGTCGTTCATGCCACTGCCGGAGCTGCAGCTGGTGCCTCAGCCGCTGTTGTCACAACGCCACTTGATGTTGTTAAAACTCAACTACAGTGTCAGGGTGTATGTGGATGCGATAGATATAGAAATGGATCGATAAGGGAAGTCATCGGGAGTATAGTTAGCAAGGATGGAGCAAGAGGGCTTATGAGGGGATGGGTTCCTAGGATGCTTTTCCATGCTCCTGCAGCAGCTATATGCTGGTCTACCTATGAAGCCTCCAAATCATTGTTCCGACGACTCAACGATAATTGA 978 50.51 MAAEATETATKFQSPDFRPVPSPPDFHPDVTVSTHDGIHFWEFMIAGSIAGSVEHMAMFPVDTVKTHMQALRSCPMKSVGVRQALRSILNSEGPAGLYRGIGAMALGAGPAHAVYFSVYEICKKFFSGGNANNSAAHAISGVFATVASDAVFTPMDMVKQRLQLGSSPNNGVWDCVKRVLREEGFRAFYASYKTTVLMNAPYTAVHFTTYEAAKRGLTEISPESVSDERWVVHATAGAAAGASAAVVTTPLDVVKTQLQCQGVCGCDRYRNGSIREVIGSIVSKDGARGLMRGWVPRMLFHAPAAAICWSTYEASKSLFRRLNDN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 263792 265172 + Bpe022147.1 Bpe08g00049 106925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00049 325 Gene3D Mitochondrial carrier domain 167 325 IPR023395 -
Bpe08g00049 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Bpe08g00049 325 SUPERFAMILY Mitochondrial carrier 37 313 IPR023395 -
Bpe08g00049 325 MobiDBLite consensus disorder prediction 1 20 - -
Bpe08g00049 325 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085
Bpe08g00049 325 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Bpe08g00049 325 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085
Bpe08g00049 325 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Bpe08g00049 325 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Bpe08g00049 325 PRINTS Mitochondrial carrier protein signature 100 120 IPR002067 GO:0055085
Bpe08g00049 325 PANTHER MITOFERRIN-1-RELATED 5 324 - -
Bpe08g00049 325 Gene3D Mitochondrial carrier domain 17 166 IPR023395 -
Bpe08g00049 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 5 324 - -
Bpe08g00049 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Bpe08g00049 325 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Bpe08g00049 325 Pfam Mitochondrial carrier protein 134 218 IPR018108 -
Bpe08g00049 325 Pfam Mitochondrial carrier protein 228 320 IPR018108 -
Bpe08g00049 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00070 Bpe-Chr1:456068 Bpe08g00049 Bpe-Chr8:263792 0 dispersed
Bpe08g00049 Bpe-Chr8:263792 Bpe08g01410 Bpe-Chr8:14948104 1.07E-06 dispersed
Bpe08g00049 Bpe-Chr8:263792 Bpe02g01241 Bpe-Chr2:15981386 3.19E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00049 K15113 - csv:101215924 536.184