Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00052 | ATGTCGTCCTCTTTTGGAAGCTTAGATACCTCTGCCAACTCTCATCCAAGCTTCAACTTCATGACCCCCTCCTTTTCCGACCTCTTGGCCTATGGCCCCGATGAGGGGCAGGGCCAGCCGATCAACGGTCATGGCCGTCTTGGGTTGTCGGATAGGATAGCGGAAAGAACAGGGTCGGGTGTGCCCAAGTTCAAGTCCTTTCCTCCGCCGTCACTCCCTTTGTCTCCACCTCCTGTTTCGCCCTCTTCTTACTTCGCTATTCCTGCTGGGTTGAGCCCGGCTGAGCTCTTGGATTCGCCTGTTCTTTTTAACTCCTCTAACCGTACTCTGCCATCTCCGACGACGGGAACATTTCCTTTCCAATCTTACAACTGGAAGAGCAATTCTCACTTTAACCAACAGAATATTAAACAGGAGAGCAAAAACTTCTCAGAGTTCTCCTTCCAAACGCAGCCAAAGCCTCTCTCAGTCAGCACAAATCCACCGACTCAGCAACAAGCATGGAATTCTCGAGAATCATCGAGGCAGAATGAATTTTCATCGGAAATTGGACCAAAGGTGACCGATTTCACGTCGACACAGATAGTTTATCCTCAAAACGACGGTGGAATTCAATCGAACTACAGCGACCACCACCACCAACAGGGTCAGACGATGAGCAGGAGATCGGACGATGGCTACAACTGGAGAAAATACGGCCAAAAACAGGTAAAAGGAAGCGAAAATCCAAGAAGTTATTACAAGTGCACGTTCCCCAGTTGCCCCACCAAGAAGAAGGTCGAAAGGTCCTTAGACGGCCAAATTACTGAGATTGTCTACAAGGGTAGCCATAACCATCCAAAACCTCAGTCGACGAGAAGGTCTTCATCGTCGTCTTTACCTGCTCCTCAGACCATTCAAGCTTCTAATCCTGTTCCTGAACAATCATATGCCCCTCACGGAAATGGACAAACAGACTCCGCGGCCACACCTGAGAATTCCTCCATAACGATGGGGGACGATGATTTTGAGCAGAGCTCCCACAGCAGTAAACGGGGAGCAGATGACTTTGATGAAGACGAAACAACTGCGAAAAGATGGAAAATGGAGGGCGACAGCGAAGGAATGTCAGCAGCCGGAAGTAGAACAGTGAGAGAGCCTAGAGTCGTAGTTCAAACCACGAGTGACATAGATATTTTAGACGATGGATACAGATGGAGAAAATATGGGCAAAAAGTGGTGAAGGGAAACCCCAATCCAAGGAGCTACTACAAGTGCACAAACCCAGGCTGTCCTGTAAGAAAGCACGTAGAGAGAGCCTCCCATGATTTGAGGGCAGTCATTACAACCTATGAGGGGAAACACAGCCACGATGTTCCAGCCGCACGAGGGAGTGGCTCAGCTGCCGTGATTAAGCCTTCCACTCTCAGCCACGCTCCAAGGCTTCAGACCTCCCGAGGCCAACCAACCGTCGGCCTAGAGATCGGGAGGAACCCCCCAAGTTTTACATTCAGCGGCGACTATGGAATGAATCAGCCACTGTTTAATGAGAATATGTTCTTGAGAACCAAGGAGGAGTTAAAGGATGATGCTTTCTTCGAATCGTTGCTACGTTGA | 1596 | 49.44 | MSSSFGSLDTSANSHPSFNFMTPSFSDLLAYGPDEGQGQPINGHGRLGLSDRIAERTGSGVPKFKSFPPPSLPLSPPPVSPSSYFAIPAGLSPAELLDSPVLFNSSNRTLPSPTTGTFPFQSYNWKSNSHFNQQNIKQESKNFSEFSFQTQPKPLSVSTNPPTQQQAWNSRESSRQNEFSSEIGPKVTDFTSTQIVYPQNDGGIQSNYSDHHHQQGQTMSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSLDGQITEIVYKGSHNHPKPQSTRRSSSSSLPAPQTIQASNPVPEQSYAPHGNGQTDSAATPENSSITMGDDDFEQSSHSSKRGADDFDEDETTAKRWKMEGDSEGMSAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDLRAVITTYEGKHSHDVPAARGSGSAAVIKPSTLSHAPRLQTSRGQPTVGLEIGRNPPSFTFSGDYGMNQPLFNENMFLRTKEELKDDAFFESLLR | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 278046 | 280134 | - | Bpe022150.1 | Bpe08g00052 | 106928 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00052 | 531 | MobiDBLite | consensus disorder prediction | 197 | 228 | - | - | |
Bpe08g00052 | 531 | MobiDBLite | consensus disorder prediction | 337 | 365 | - | - | |
Bpe08g00052 | 531 | SUPERFAMILY | WRKY DNA-binding domain | 222 | 282 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | SMART | WRKY_cls | 223 | 281 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | SMART | WRKY_cls | 393 | 452 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | MobiDBLite | consensus disorder prediction | 29 | 75 | - | - | |
Bpe08g00052 | 531 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 43 | 471 | IPR044810 | GO:0003700 | |
Bpe08g00052 | 531 | Pfam | WRKY DNA -binding domain | 394 | 450 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | Pfam | WRKY DNA -binding domain | 224 | 280 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | ProSiteProfiles | WRKY domain profile. | 388 | 453 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | ProSiteProfiles | WRKY domain profile. | 224 | 282 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | MobiDBLite | consensus disorder prediction | 278 | 336 | - | - | |
Bpe08g00052 | 531 | PANTHER | WRKY TRANSCRIPTION FACTOR WRKY24-LIKE | 43 | 471 | - | - | |
Bpe08g00052 | 531 | SUPERFAMILY | WRKY DNA-binding domain | 385 | 453 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | Gene3D | WRKY domain | 208 | 283 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | MobiDBLite | consensus disorder prediction | 272 | 377 | - | - | |
Bpe08g00052 | 531 | MobiDBLite | consensus disorder prediction | 197 | 214 | - | - | |
Bpe08g00052 | 531 | Gene3D | WRKY domain | 380 | 446 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe08g00052 | 531 | MobiDBLite | consensus disorder prediction | 146 | 185 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00733 | Bpe-Chr3:27429969 | Bpe08g00052 | Bpe-Chr8:278046 | 8.40E-92 | dispersed | |
Bpe04g01294 | Bpe-Chr4:19204471 | Bpe08g00052 | Bpe-Chr8:278046 | 2.52E-106 | dispersed | |
Bpe08g00052 | Bpe-Chr8:278046 | Bpe09g00135 | Bpe-Chr9:910747 | 8.52E-94 | dispersed | |
Bpe08g00052 | Bpe-Chr8:278046 | Bpe03g00760 | Bpe-Chr3:27637758 | 1.92E-98 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21702 | PF03106 | WRKY | 6.80E-25 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00052 | K13424 | - | tcc:18591046 | 642.114 |