Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00057 ATGTCTAACGTCAAGCGTGAGATATCCATCATGTCCCGACTTCGCCACCCCAACATCGTCTGCCTCCACGAAGTCCTCGCCAACAAGTCTAAGATTTTCTTTGTCATGGAGTTTGTCAAAGGTGGCGAATTGTTCTCCAAGATCACCAAAGGCAGGTTCACCGAAGATCTCAGCCGCAAGTATTTTCAGCAGCTGATTTCTGCCGTCGGTTTTTGCCATTCTCGAGGAGTTTTTCACCGCGATTTGAAGCCCGAGAATCTTCTCGTCGACGATAATGGTAATTTAAAGGTTACCGATTTCGGACTCAGCGCCGTCGCGGACCAGATTGGACCCGACGGGCTGCTGCATACTCTCTGCGGCACGCCTGCGTACGTGGCGCCGGAGGTTTTGATAAAAAAAGGCTACGACGGGGCGAAGTTGGATGTGTGGTCGTGCGGTGTCATTCTCTTCGTGCTTAATGCAGGCTACTTACCGTTCAACAATCCAAATCTAATGGCAATGTACAAGAAAATTTACAAGGGCGAGTATCGGTGCCCCAGGTGGATGTCGCCGGACCTCAAGCGGTTTTTATCTCGGCTTCTCGACACAAATCCACAGACGAGGATCACCGTCGATGAAATCTTGAAGGATCCGTGGCTCACAAAAGGCGGTTTCGAGGAGATTAAATTCCATGATGTTTGCTCCAAATTTGACGACAAAGAGGACCATAAAAGTAAGATTCTAACCGCCTTCGATATCATATCGTTCTCGCCTGGATTGGATTTATCTGGTCTGTTCGACGAAGCGCACAATTCTGTTGAAAACAGCGAACGATTGGTATCAGCAGAGACGCCGGAGAAAATATTTGAGAAAATAGAAGAGACATGCAAAAAAGAGAATCTGAGGACGAAGAAGAAAGAGTTGGCGATGGAGGTGGAGGTAGAAGGGGGAGACGGAAACTCCGTGATAGGAATCGAGTTGTACCGATTAACGGAGGGAATGATGATGGTAGAAGTGAGGAAAAGAGGCGGAGACGGGGTGTTTTACAGGGAAATATGGAAGAATAAACTGAGGGCTCGGCTTGTTGGGCTGTTAGCTCATCCAGCAGCGGAGGCAGAGGCGGAGGCGGAGGCGGAGGCTTCTTCATCGCAGAAGGTTGTGGTGGAGGACGTCGAGTAA 1158 49.31 MSNVKREISIMSRLRHPNIVCLHEVLANKSKIFFVMEFVKGGELFSKITKGRFTEDLSRKYFQQLISAVGFCHSRGVFHRDLKPENLLVDDNGNLKVTDFGLSAVADQIGPDGLLHTLCGTPAYVAPEVLIKKGYDGAKLDVWSCGVILFVLNAGYLPFNNPNLMAMYKKIYKGEYRCPRWMSPDLKRFLSRLLDTNPQTRITVDEILKDPWLTKGGFEEIKFHDVCSKFDDKEDHKSKILTAFDIISFSPGLDLSGLFDEAHNSVENSERLVSAETPEKIFEKIEETCKKENLRTKKKELAMEVEVEGGDGNSVIGIELYRLTEGMMMVEVRKRGGDGVFYREIWKNKLRARLVGLLAHPAAEAEAEAEAEASSSQKVVVEDVE 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 306082 307239 - Bpe022155.1 Bpe08g00057 106933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00057 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Bpe08g00057 385 CDD CIPK_C 242 351 - -
Bpe08g00057 385 Gene3D Transferase(Phosphotransferase) domain 1 44 217 - -
Bpe08g00057 385 SUPERFAMILY Protein kinase-like (PK-like) 3 227 IPR011009 -
Bpe08g00057 385 Pfam Protein kinase domain 3 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00057 385 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 2 363 - -
Bpe08g00057 385 PANTHER - 2 363 - -
Bpe08g00057 385 Gene3D Kinase associated domain 1, KA1 237 359 - -
Bpe08g00057 385 ProSiteProfiles NAF domain profile. 236 260 IPR018451 GO:0007165
Bpe08g00057 385 Pfam NAF domain 239 298 IPR004041 GO:0007165
Bpe08g00057 385 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Bpe08g00057 385 SMART serkin_6 2 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00057 385 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00067 Bpe-Chr1:432007 Bpe08g00057 Bpe-Chr8:306082 0 dispersed
Bpe08g00057 Bpe-Chr8:306082 Bpe01g00869 Bpe-Chr1:18105500 8.51E-142 dispersed
Bpe08g00057 Bpe-Chr8:306082 Bpe01g00643 Bpe-Chr1:4332488 4.44E-124 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63434 PF00069 Pkinase 4.30E-60 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00057 - - tcc:18591074 516.538