Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00060 ATGTCTAAGAACAAAGTTGGATACCACCGGAGCATCGATGAATCCGAGGCTGTCTTTGGTTACCAAGAGACAGATCCCTCCGGTCGTTACGGTCGATTGGAAGAAGTTCTTGGGAAGGGAGCCATGAAAACAGTTTACAGGGCAGTTGATGAAGTTCTTGGAATGGAGGTAGCATGGAATCAGATCAAACTGAATGTGGTTCTTCGTTCACCCGAAGATTTGGAGAGGCTGTACTCAGAGGTTCACCTCCTCAGCACCCTCAAGCATGATTCGATCATTCGATTCTACACCTCTTGGATCGATGTCGACAACAAGACCTTCAATTTTATCACCGAAATGTTTACTTCTGGTTCACTCAGACAATATAGAATGAAATATTGTCGGGTTGACATTCGAGCTATAAAGAATTGGGCGCGTCAAATCCTACAAGGGCTTGTTTATCTCCACGAGCACGATCCTCCGATAATTCACAGAGACCTTAAGTGCGATAATATCTTCGTTAATGGTCATCTTGGGCAAGTCAAGATTGGTGATCTTGGGCTTGCAACGATTCTCCGCAGCTCTCAATCGGCTCATAGTGTTATAGGCACACCTGAGTTCATGGCTCCAGAACTATACGAGGAAGATTACAATGCGCTAGTTGATGTGTACTCATTTGGCATGTGTGTTCTTGAGATGCTTACTTCCGAGTATCCTTATAGTGAATGTGCCAACCCGGCTCAAATTTACAAGAAAGTTACTTCTGGGAAGCTTCCTGCATCTTTCTACCGGGTTCAAGATCTCGAGGCACAGCGCTTCATCGGGAAATGTTTGGCCCCTGTGTCAAAGAGAGTTTCCTCAAAAGAACTATTACTCGATTCGTTTCTCTCGATTGACGAAATTAGGAATGTGTCTGAGGAAAAGTATGAAATCCAGAGGCCATTTTTAAATGCCAAAGAAATGGAGAAATTGCACTTAACTGATGATTTACCAAGGACTGACATGACAATAACAGGGAAGCTGAATCCTGCGGATGATACTGTCTTCCTGAAAGTTCAAATTGCCGATAACAATGGTTCGGGCAGGAATATATATTTTCCATTTGATATTGTGAGTGACACGCCAATTGATGTGGCGAGGGAGATGGTGAAGGAGTTAGAGATAAAGGATTGGGAACCATTTGAGATTGCAGTGATGATCGAAGGTGAAATATCCGCGTTGGTTCCTAATTCAAAGAGAGATACCTTGTTTCATCCAGAATCATATCATGGTTATCAAGAATATGCGGACGGACCCCATCATAGCTTTCATTCTTTCTCATCATCCTCCCAAGCAACATTATGCACTTCTCCGAGGACAGCTGTCGTTAGTTGGTCTCGAGAAGATTTGCTGGATGATAGCAGCTCCCAGAGCTCTTCCCTTTCTTGGAAATATTCAAACTTGAATTATATTTCTGTGGATGAGCACGAGTGGATGAATAACAAGTTCACGAACTGTGTGCAATCTATACCAGGAAATTGTTACAAACAGAGCAAAGGTTTATTACAGCCCCAAGAAGCATCGACTTCTAAAGATGCAAGGGCAATGAACAATCATAAATTGACAAGGAACAGATCGTTTGTCGATGTGCACAGCCAATTACTACACCGGTCCTTAGTCGAGGAAGTGAATCGAAGACGGTTGTTCAAGACAGTTGGAGCAGTGGAAAACATCGGATATCAAGCCCCGTGCGAAGTTTCTCTGAGCCCGAGGGCCGGAAGGGCTCGTGGGGATGCAGATTTTATAAAAAATGCAAGAACTAGCAAAGCTCAAGGACATCAAAGGCGTAAGTAA 1812 43.6 MSKNKVGYHRSIDESEAVFGYQETDPSGRYGRLEEVLGKGAMKTVYRAVDEVLGMEVAWNQIKLNVVLRSPEDLERLYSEVHLLSTLKHDSIIRFYTSWIDVDNKTFNFITEMFTSGSLRQYRMKYCRVDIRAIKNWARQILQGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLATILRSSQSAHSVIGTPEFMAPELYEEDYNALVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPASFYRVQDLEAQRFIGKCLAPVSKRVSSKELLLDSFLSIDEIRNVSEEKYEIQRPFLNAKEMEKLHLTDDLPRTDMTITGKLNPADDTVFLKVQIADNNGSGRNIYFPFDIVSDTPIDVAREMVKELEIKDWEPFEIAVMIEGEISALVPNSKRDTLFHPESYHGYQEYADGPHHSFHSFSSSSQATLCTSPRTAVVSWSREDLLDDSSSQSSSLSWKYSNLNYISVDEHEWMNNKFTNCVQSIPGNCYKQSKGLLQPQEASTSKDARAMNNHKLTRNRSFVDVHSQLLHRSLVEEVNRRRLFKTVGAVENIGYQAPCEVSLSPRAGRARGDADFIKNARTSKAQGHQRRK 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 314245 318082 - Bpe022158.1 Bpe08g00060 106936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00060 603 SUPERFAMILY Protein kinase-like (PK-like) 33 290 IPR011009 -
Bpe08g00060 603 ProSiteProfiles Protein kinase domain profile. 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00060 603 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe08g00060 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 10 577 - -
Bpe08g00060 603 Gene3D Phosphorylase Kinase; domain 1 14 112 - -
Bpe08g00060 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Bpe08g00060 603 Gene3D Transferase(Phosphotransferase) domain 1 114 294 - -
Bpe08g00060 603 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 577 - -
Bpe08g00060 603 CDD STKc_WNK 29 289 - -
Bpe08g00060 603 SMART serkin_6 31 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01302 Bpe-Chr4:19366102 Bpe08g00060 Bpe-Chr8:314245 0 dispersed
Bpe08g00060 Bpe-Chr8:314245 Bpe15g00655 Bpe-Chr15:17291114 6.79E-147 dispersed
Bpe08g00060 Bpe-Chr8:314245 Bpe06g00276 Bpe-Chr6:13710977 8.74E-138 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63435 PF00069 Pkinase 1.50E-47 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00060 K08867 - tcc:18591081 762.681