Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe08g00060 | ATGTCTAAGAACAAAGTTGGATACCACCGGAGCATCGATGAATCCGAGGCTGTCTTTGGTTACCAAGAGACAGATCCCTCCGGTCGTTACGGTCGATTGGAAGAAGTTCTTGGGAAGGGAGCCATGAAAACAGTTTACAGGGCAGTTGATGAAGTTCTTGGAATGGAGGTAGCATGGAATCAGATCAAACTGAATGTGGTTCTTCGTTCACCCGAAGATTTGGAGAGGCTGTACTCAGAGGTTCACCTCCTCAGCACCCTCAAGCATGATTCGATCATTCGATTCTACACCTCTTGGATCGATGTCGACAACAAGACCTTCAATTTTATCACCGAAATGTTTACTTCTGGTTCACTCAGACAATATAGAATGAAATATTGTCGGGTTGACATTCGAGCTATAAAGAATTGGGCGCGTCAAATCCTACAAGGGCTTGTTTATCTCCACGAGCACGATCCTCCGATAATTCACAGAGACCTTAAGTGCGATAATATCTTCGTTAATGGTCATCTTGGGCAAGTCAAGATTGGTGATCTTGGGCTTGCAACGATTCTCCGCAGCTCTCAATCGGCTCATAGTGTTATAGGCACACCTGAGTTCATGGCTCCAGAACTATACGAGGAAGATTACAATGCGCTAGTTGATGTGTACTCATTTGGCATGTGTGTTCTTGAGATGCTTACTTCCGAGTATCCTTATAGTGAATGTGCCAACCCGGCTCAAATTTACAAGAAAGTTACTTCTGGGAAGCTTCCTGCATCTTTCTACCGGGTTCAAGATCTCGAGGCACAGCGCTTCATCGGGAAATGTTTGGCCCCTGTGTCAAAGAGAGTTTCCTCAAAAGAACTATTACTCGATTCGTTTCTCTCGATTGACGAAATTAGGAATGTGTCTGAGGAAAAGTATGAAATCCAGAGGCCATTTTTAAATGCCAAAGAAATGGAGAAATTGCACTTAACTGATGATTTACCAAGGACTGACATGACAATAACAGGGAAGCTGAATCCTGCGGATGATACTGTCTTCCTGAAAGTTCAAATTGCCGATAACAATGGTTCGGGCAGGAATATATATTTTCCATTTGATATTGTGAGTGACACGCCAATTGATGTGGCGAGGGAGATGGTGAAGGAGTTAGAGATAAAGGATTGGGAACCATTTGAGATTGCAGTGATGATCGAAGGTGAAATATCCGCGTTGGTTCCTAATTCAAAGAGAGATACCTTGTTTCATCCAGAATCATATCATGGTTATCAAGAATATGCGGACGGACCCCATCATAGCTTTCATTCTTTCTCATCATCCTCCCAAGCAACATTATGCACTTCTCCGAGGACAGCTGTCGTTAGTTGGTCTCGAGAAGATTTGCTGGATGATAGCAGCTCCCAGAGCTCTTCCCTTTCTTGGAAATATTCAAACTTGAATTATATTTCTGTGGATGAGCACGAGTGGATGAATAACAAGTTCACGAACTGTGTGCAATCTATACCAGGAAATTGTTACAAACAGAGCAAAGGTTTATTACAGCCCCAAGAAGCATCGACTTCTAAAGATGCAAGGGCAATGAACAATCATAAATTGACAAGGAACAGATCGTTTGTCGATGTGCACAGCCAATTACTACACCGGTCCTTAGTCGAGGAAGTGAATCGAAGACGGTTGTTCAAGACAGTTGGAGCAGTGGAAAACATCGGATATCAAGCCCCGTGCGAAGTTTCTCTGAGCCCGAGGGCCGGAAGGGCTCGTGGGGATGCAGATTTTATAAAAAATGCAAGAACTAGCAAAGCTCAAGGACATCAAAGGCGTAAGTAA | 1812 | 43.6 | MSKNKVGYHRSIDESEAVFGYQETDPSGRYGRLEEVLGKGAMKTVYRAVDEVLGMEVAWNQIKLNVVLRSPEDLERLYSEVHLLSTLKHDSIIRFYTSWIDVDNKTFNFITEMFTSGSLRQYRMKYCRVDIRAIKNWARQILQGLVYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLATILRSSQSAHSVIGTPEFMAPELYEEDYNALVDVYSFGMCVLEMLTSEYPYSECANPAQIYKKVTSGKLPASFYRVQDLEAQRFIGKCLAPVSKRVSSKELLLDSFLSIDEIRNVSEEKYEIQRPFLNAKEMEKLHLTDDLPRTDMTITGKLNPADDTVFLKVQIADNNGSGRNIYFPFDIVSDTPIDVAREMVKELEIKDWEPFEIAVMIEGEISALVPNSKRDTLFHPESYHGYQEYADGPHHSFHSFSSSSQATLCTSPRTAVVSWSREDLLDDSSSQSSSLSWKYSNLNYISVDEHEWMNNKFTNCVQSIPGNCYKQSKGLLQPQEASTSKDARAMNNHKLTRNRSFVDVHSQLLHRSLVEEVNRRRLFKTVGAVENIGYQAPCEVSLSPRAGRARGDADFIKNARTSKAQGHQRRK | 603 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 314245 | 318082 | - | Bpe022158.1 | Bpe08g00060 | 106936 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe08g00060 | 603 | SUPERFAMILY | Protein kinase-like (PK-like) | 33 | 290 | IPR011009 | - | |
Bpe08g00060 | 603 | ProSiteProfiles | Protein kinase domain profile. | 31 | 289 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00060 | 603 | Pfam | Protein kinase domain | 34 | 288 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe08g00060 | 603 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED | 10 | 577 | - | - | |
Bpe08g00060 | 603 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 112 | - | - | |
Bpe08g00060 | 603 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 155 | 167 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe08g00060 | 603 | Gene3D | Transferase(Phosphotransferase) domain 1 | 114 | 294 | - | - | |
Bpe08g00060 | 603 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 10 | 577 | - | - | |
Bpe08g00060 | 603 | CDD | STKc_WNK | 29 | 289 | - | - | |
Bpe08g00060 | 603 | SMART | serkin_6 | 31 | 289 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01302 | Bpe-Chr4:19366102 | Bpe08g00060 | Bpe-Chr8:314245 | 0 | dispersed | |
Bpe08g00060 | Bpe-Chr8:314245 | Bpe15g00655 | Bpe-Chr15:17291114 | 6.79E-147 | dispersed | |
Bpe08g00060 | Bpe-Chr8:314245 | Bpe06g00276 | Bpe-Chr6:13710977 | 8.74E-138 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63435 | PF00069 | Pkinase | 1.50E-47 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe08g00060 | K08867 | - | tcc:18591081 | 762.681 |