Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00070 ATGAGAAACGAGTTTAATAAACGAGATTATGCTCCTGTTTTGCTTGAATTATCAGCTGCGAATGATCTGACTGGATTCAGAAGTGCTGGGGAAGAAAAGGGTTATGATGTTGATGAGGCAAGTATGTGGTATGGAAGGAGCCCTGGCTCGAAAAAAATGGGATACGAAGAAAGAACTCCGCTAATGATTGCAGCCATGTTTGGAAGCGTAGATGTGGTAGTCTATGTTCTTAAATCTGGCCTTGTTAATATTAATCGAGCTTCTGGTTCTGATGGGGCAACAGCCCTCCATTGTGCTGTTGTTGGCGGCTCGGCAGCTTCATCTCATGTTGTTCGGCTTTTGCTCGGTGGTTCGGCTGATATTAATGCTGCAGATGCAAATGGAAAACGCCCAATTGATTTGATTTATTCTTATAAGTCTGTCTATGATTCGATGAAAAAATCACTTGCAGCAATGCTGATGGGCCATTTTGATGAAGAAACATCCAGTTTATACGACCGAGTAATTAACGATATGGGAGAGGAGATTGTGACAACTTCAGTGCCAAAGGATGGGAATGAAAAGAAAGAGTATCCAGTTGATCTTTCTCTTCCAGACATCAACAATGGGATTTATAGCACGGACGAATTTCGAATGTTCACATTTAAAGTCAGACCCTGCTCCAGAGCTTACTCTCACGATTGGACTGAGTGCCCATTTGTTCACCCAGGCGAAAATGCAAGGCGAAGAGATCCAAGGAAATTCAATTACAGCTGTGTTCCTTGCCCGGAGTTTAAAAAGGCTTGCTGTCGGCTAGGAGATGCTTGTGAGTATGCCCATGGAATTTTCGAGTGTTGGCTTCATCCAGCTCAGTATCGGACCAGACTCTGTAAAGATGAAGTCGGATGTGGAAGAAAGGTCTGTTTTTTTGCACACAAGCCGGAAGAGCTTCGGCCCTTGTATGCTTCCACTGGTTCAGCTGCTGCGTCTAAAGATTTGGCTTTAACGAGTCTATATGCCCTTGGTTCAATACCTACTTCACCCTCCAGGGCCTCTTCCGCAATGTGGAAAATTCTTCCTGGTCATATTCCACCTCCTATCTTGCAGCTACCAAAGGGGAGAGCGAATGCTGCACAGATCGATGAACTCAGAAGACTGCAAATTATGGACGAGATATCAAGCCTCTCCTCCCCGTCAAGTTGGGGTAATGGCGCGGCCAGTGCATTGCCATCGGTTATGTCCTCTGGAAGCATGTTTTTGGAAGTGAACAGGCTTGGGGGAGTGAAGCCTAATGACCTTGAAGATCTTTTTGGGCAGTTAAATTCAGGAATGTCTCCTCAATTCCGAGGAGGCTCGATGGATTCTGTGGTGTCTCAGTTACAGTCACCGGCTGGGATCAAAATTCGACAAAGCCTGGAAAATCATCTCCAGTCAAGCTACCCCAGTAGCAATGCTTCGTCTCCTATCAACAGGTCAAATTCATTTGGGTTCAACACATCTATAGCTTCTGAAGGTGCAGTTTTGAGCTTAAGATCTGCTAGCTTTGCAACACGAAACCAGAGCTTCGTCGAACGCAGTCCTTTGAATCAAAATTCTGGAATTTCATCTCCTCCTGGGCAGTCAACAAATTTTCCGTCTCGCATGTCGGCTTGGGGCTCGCCCGATGGAAAATTGGAGTGGGGGATACAAAGAGAAGAGCTTAAATTGTTGCAAAAATCTGCTTCATTTGGCCTCAGAAGCAGCAGAACCACACAGTCAGCCTACGATGAACCAGTAACGTCGTCCCTGGTCAAAGACACACTGCCGGTGAAAGCAGGGCAGTTGGGATTTGAGGAGCGCCAGAAGCAGATCTGCCATCTTGACAACGGTGGTTCCGAGACGATGATTCCTCCATTGGTTGAGCAATTCTACGCGGAACAAGAGCAGCTGGTGGCTTAA 1917 46.17 MRNEFNKRDYAPVLLELSAANDLTGFRSAGEEKGYDVDEASMWYGRSPGSKKMGYEERTPLMIAAMFGSVDVVVYVLKSGLVNINRASGSDGATALHCAVVGGSAASSHVVRLLLGGSADINAADANGKRPIDLIYSYKSVYDSMKKSLAAMLMGHFDEETSSLYDRVINDMGEEIVTTSVPKDGNEKKEYPVDLSLPDINNGIYSTDEFRMFTFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFNYSCVPCPEFKKACCRLGDACEYAHGIFECWLHPAQYRTRLCKDEVGCGRKVCFFAHKPEELRPLYASTGSAAASKDLALTSLYALGSIPTSPSRASSAMWKILPGHIPPPILQLPKGRANAAQIDELRRLQIMDEISSLSSPSSWGNGAASALPSVMSSGSMFLEVNRLGGVKPNDLEDLFGQLNSGMSPQFRGGSMDSVVSQLQSPAGIKIRQSLENHLQSSYPSSNASSPINRSNSFGFNTSIASEGAVLSLRSASFATRNQSFVERSPLNQNSGISSPPGQSTNFPSRMSAWGSPDGKLEWGIQREELKLLQKSASFGLRSSRTTQSAYDEPVTSSLVKDTLPVKAGQLGFEERQKQICHLDNGGSETMIPPLVEQFYAEQEQLVA 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 378670 380586 - Bpe022169.1 Bpe08g00070 106946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00070 638 MobiDBLite consensus disorder prediction 517 542 - -
Bpe08g00070 638 SUPERFAMILY Ankyrin repeat 53 133 IPR036770 -
Bpe08g00070 638 SMART ANK_2a 91 123 IPR002110 GO:0005515
Bpe08g00070 638 SMART ANK_2a 56 86 IPR002110 GO:0005515
Bpe08g00070 638 ProSiteProfiles Ankyrin repeat profile. 91 126 IPR002110 GO:0005515
Bpe08g00070 638 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 11 619 - -
Bpe08g00070 638 Gene3D - 250 312 - -
Bpe08g00070 638 SMART c3hfinal6 284 307 IPR000571 GO:0046872
Bpe08g00070 638 SMART c3hfinal6 249 275 IPR000571 GO:0046872
Bpe08g00070 638 PANTHER UNKEMPT FAMILY MEMBER 11 619 IPR045234 -
Bpe08g00070 638 MobiDBLite consensus disorder prediction 517 543 - -
Bpe08g00070 638 ProSiteProfiles Zinc finger C3H1-type profile. 249 276 IPR000571 GO:0046872
Bpe08g00070 638 ProSiteProfiles Ankyrin repeat region circular profile. 91 125 - -
Bpe08g00070 638 Coils Coil 629 638 - -
Bpe08g00070 638 Gene3D - 21 153 IPR036770 -
Bpe08g00070 638 Pfam Ankyrin repeats (3 copies) 52 125 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00070 Bpe-Chr8:378670 Bpe15g01239 Bpe-Chr15:20940315 0 dispersed
Bpe04g01745 Bpe-Chr4:23157803 Bpe08g00070 Bpe-Chr8:378670 2.64E-179 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21703 PF12796 Ank_2 2.70E-08 CL0465 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00070 - - cit:102625565 714.146