Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe08g00077 ATGGAGGTCTCGTGGGAGAAAAGCGTAACAGATTCCATTAACACTGTATACCTTCTATTTTCTGCGTACCTTGTGTTTGTTATGCAGCTTGGGTTTGCGATGCTCTGTGCCGGCTCGGTTCGAGCCAAGAACGCCATGAACATAATGCTCACTAACGTGGTAGACGCCGTCGTCGGGAGCATCTCCTACTATCTCTTCGGCTTCGCTTTTGCATTTGGGGATGGCTCCAGTTCTAATCCCTTCATTGGGTCAACCTACTTTGCTCTCGTAGACATACCCAGCAGCTCCTATGATTACAGCTTCTTTCTTTACCAGTGGGCCTTCGCGATTGCCGTTGCCGGTATAACCAGCGGCTCCATAGCTGAGCGAACGCAGTTTCCTTCCTACCTTATTTTCTCATTTTTTCTCACTGGGTTTGTATATCCTGTTGTTGTTCATTGGATTTGGTCTTCCAGTGGGTGGCTCAGCCCGAATTCGAGCGACTTGCTGCTTGATTCAGGCGCAATCGACTTTGCTGGGAGTGGTGTGGTGCATTTGGTGGGTGGGATTGCTGGGCTTTGGGGCGCTTTGATTGAAGGGCCGCGGGTTGGGAGGTTTGATGCCTTTGGAAAGCCCGTGCCAATGCGTGGGCATAATGCGACGCTGGTTGTTCTTGGCACATTTTTGCTGTGGTTCGGATGGTTCGGCTTTAACCCTGGTTCGTTTGATAAGATTTTGGTGTCCTACCCAGGCACAACGAACGAGGGTAATTGGACTGGAGTAGGCCGGACTGCGGTGAACACTACATTGGCTGGGTCTGCTGCCGGAATAGCTACTCTTTTTGGCCGGAGATTGCTCATCGGCCATTGGGATGCCTTAGATGTTTGCAATGGGGTACTTGGTGGGTTCGTTGCAATCACTTCAGGCTGTTCCGTAGTCGAACCATGGGCAGCAATCGTATGTGGCTTGGTAGCCGCTTGGGTGCTGATTCTGCTCAACATTTTGGCGCTCAAACTGCGGTTTGACGACCCACTAGAGGCCACCCAATTGCATGGTGGGTGCGGGATGTGGGGTGTGATATTCACTGGCTTGTTTGCCAAGAAAGAATTTGTGATTGATGCTTACAACGCCGGAGACACCAGCGTCGTGCGACCCTATGGCCTCTTATTAGGTGGGGGGTGGAAGCTGCTGGGAGCTCAAGTGATTGAGGTTTTAGTGATTGTGGGTTGGGTTAGCTTCACAATGGGCCCTCTTTTCTTCGGTCTTCATAAGCTTAGAATTTTGAGGATTTCTGTTGAGGAGGAGGTTGCAGGTCTCGATATATCTAGCCATGGTGGATATGCATACAGCCATACAGATGATAGTCAGCCTAGATTTTACGCCGACTACCTACGTCTACAAGCTCAGCCTTCTTGA 1395 50.54 MEVSWEKSVTDSINTVYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYLFGFAFAFGDGSSSNPFIGSTYFALVDIPSSSYDYSFFLYQWAFAIAVAGITSGSIAERTQFPSYLIFSFFLTGFVYPVVVHWIWSSSGWLSPNSSDLLLDSGAIDFAGSGVVHLVGGIAGLWGALIEGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPGTTNEGNWTGVGRTAVNTTLAGSAAGIATLFGRRLLIGHWDALDVCNGVLGGFVAITSGCSVVEPWAAIVCGLVAAWVLILLNILALKLRFDDPLEATQLHGGCGMWGVIFTGLFAKKEFVIDAYNAGDTSVVRPYGLLLGGGWKLLGAQVIEVLVIVGWVSFTMGPLFFGLHKLRILRISVEEEVAGLDISSHGGYAYSHTDDSQPRFYADYLRLQAQPS 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 420065 421459 - Bpe022175.1 Bpe08g00077 106953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe08g00077 464 SUPERFAMILY Ammonium transporter 10 423 - -
Bpe08g00077 464 PANTHER AMMONIUM TRANSPORTER 1 462 - -
Bpe08g00077 464 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bpe08g00077 464 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 462 - -
Bpe08g00077 464 Gene3D Ammonium transporter AmtB like domains 3 458 IPR029020 -
Bpe08g00077 464 Pfam Ammonium Transporter Family 17 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bpe08g00077 464 TIGRFAM amt: ammonium transporter 14 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00093 Bpe08g00077 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00077 Bpe-Chr8:420065 Bpe11g01296 Bpe-Chr11:9691859 0 dispersed
Bpe01g00093 Bpe-Chr1:578981 Bpe08g00077 Bpe-Chr8:420065 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe08g00077 K03320 - pvy:116129597 787.719